Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01221 ATGTTGTCTCTTTTCTTATCCCTTTCCCACATACACCTTTCTAACGATGTTCTCCTTCAACCCGTTTTCCTTCATGGCTTATCCGGCTTCCTCCACTTTCTGTTGCTCGTCGCGGTTCCGCTGTCATGGGTTCGGAAGAAACTCACAACACGTGTCAGGGATGAGTCTAAGGAGAAGCACGACAGCACCCTCTTCAAAACGACCGTGTTTTGTTCTCTGGGTGTTTCTGCTTTCAGTTTGCTCCTCTGTTTGTTCAATTACTTCTATTGGTACTCTAGTAGCTGGTCAGAAGAAGAGCTCGTGACCCTTTTGGATTTGGCGCTCAAAACAGTTGCGTGGGGCGTTGTTTGTGTTTGCTTGAACAAGGGGTTCTTCAGTTCTGGCGAAAGAAGGTTCTCATTCCTCTTCAAAGCTTGGTGTGTCTTGTACCTCTTCGTTTCTTGCTATTGCTTCGTGGTGGACATTGTTGTTATATCAGAGAGACGCTATGCTTTGCCAACTCAGTACTTGGTTTCTGATGTGGTTTCCACTTGTGTTGGTTTGTTATTCTGTTACGTGGGGTATCTTGTGAAAAACAAAGGCCACGTTCGGGAAAACGAAAATAACGGTATTCAGGAACCTCTTTTGAATGGTGGCACTGATGCCTTGAGATCAAAAGAGACCAATGGTGGGGACACTGTTACCCCTTTCTCACATGCTGGCATTTTGAGCCTTCTTACCTTCTCTTGGGTGGGTCCTCTTATAGCTGTTGGCAATAAGAAGACCTTGGACCTTGAGGATGTTCCACAACTAGACAGCACTGACAGTATTGTTGGTGCTTTTCCTGGGTTCAGAGATAAACTTGAGGCTGATTGTGGTACGATAAATAGTGTCACCACACTTAAGTTGGTGAAGTCGTTAGTGATGTCAGCGTGGAAGGAGATTCTTTTCACAGCTTTTCTTGCATTGTTAAACACTTTGGCTTCTTATGTTGGTCCTTATCTTATTGACAGTTTTGTTCAGTACCTTGATGGACAGCGGCTTTTTGAAAACCAGGGCTATGTTTTGGTTTGTTCGTTTTTCTTTGCAATGATTGTAGAGTGTCTGTCCCAAAGACATTGGTTCTTTAGGTTGCAGCAAGTTGGACTTCGAATTCGTGCACTGCTTGTCACGATGATCTATAACAAGGCTCTGACCCTTTCTTGTCAGTCAAAGCAGGGTCATACTTCTGGAGAAATAATCAATTTCATGACTGTTGATGCTGAAAGAGTTGCAACCTTCAGTTGGTATATGCATGATTTGTGGATGGTGGCTTTGCAAGTTACATTGGCCTTGTTGATTTTGTATAAAAACCTTGGGCTGGCTTCAATTGCTGCTTTTGTTGCAACTATCATTGTTATGCTGGCAAATGTTCCATTGGGATCATTGCAAGAGAAATTTCAAAAGAAGTTGATGGAGTCAAAAGATACTAGAATGAAGGCCACATCCGAGATCTTAAGGAATATGAAGATTCTCAAACTACAAGGATGGGAAATGAAGTTTCTATCAAAAATAACTGAGCTTAGGAAAACTGAGCAAGGCTGGTTAAAAAAGTTTGTCTATACTGCAGCCATGACCACGTTTGTGTTTTGGGGTGCCCCCACATTTGTATCTGTGGTTACTTTTAGCACTTGTATGATTATAGGGACCCCCCTAGAATCAGGGAAGATATTGTCTGCACTTGCGACATTCCGAATTCTTCAAGAGCCCATTTATGGTCTTCCAGATACAATTTCGATGATAGTACAAACTAAAGTGTCTCTTGATAGGATTGCATCATTCCTGCGTCTTGATGACTTACCCTCTGATGTTGTAGAGAAGCTTCCCCGTGGTAGTTCTGAAACAGCAATTGAAGTAGTTGATGGAAACTTTTCTTGGGAGTTATCTTCCCCTAACCCAACATTGCAAAATATAAATATTAAAGTTTTTCGCGGGATGAGGGTTGCAGTTTGTGGTACTGTTGGATCAGGCAAATCTACTTTACTTTCTTGTGTATTGGGAGAAGTACCTAAGATATCAGGCATCCTTAAGGTTTGTGGAACAAAGGCCTATGTTACTCAGTCTCCATGGATACAAAGTGGTAAGATAGAGGATAATATATTGTTTGGAAAACAAAAGGATAGGGAAAAGTATGAGAGGGTACTTGAGGCCTGTTCTCTGAAGAAGGATCTGGAGATTCTGCCATTTGGTGATCAGACAATCATAGGAGAGCGTGGGATAAATTTGAGTGGCGGACAAAAGCAAAGAATACAAATTGCGCGTGCACTTTACCAAGATGCTGATATATATCTATTTGATGATCCTTTCAGTGCAGTGGATGCTCACACAGGCTCTCACCTTTTTAAGGAATGCTTGTTGGACCTTCTAAGTTCAAAGACAGTGGTTTATGTCACTCATCAAGTAGAGTTCTTACCTGCTGCTGATCTTATATTGGTCATGAAAAACGGGAAAATTACTCAGTGTGGAAGGTATACTGATCTGCTTAATAGTGGAACTGATTTTATGGAACTTGTTGGTGCACACAAAAAAGCTTTGTCTACACTAGATTCATTAGATGGAGCTACAGTATCTAATGAAATAAGCACAGTGGAACAAGATTTAAATGTATCTGACATGCAAGGTCTTAAAGAAGAGGAGGCAAGCAAAAATGAACAAAATGGTGAAACAGACAACAAAAGTGAACCTAAAGGACAACTTGTTCAGGAAGAAGAAAGGGAGAAAGGTAAAGTTGAGTTTTCAGTATATTGGAAATGTATCACAACAGCATATGGAGGAGCTCTTGTGCCATTCATATTGTTGGCTCAGATTCTTTTTCAAGCTCTTCAAATCGGAAGCAATTATTGGATGGCTTGGGCAACTCCCGTATCAACAGATGTGGAACCACCTGTTGAAGGAACAACTCTTATTGTGGTTTATGTTAGTTTGGCCATTGGAAGTTCTTTTTGCATCCTTGCCAGAGCAATGCTTCTCGTCACAGCTGGTTATAAGACAGCTACTATACTCTTCAATAAAATGCACTTTTGTATTTTTCGTGCTCCAATGTCATTTTTCGATTCCACTCCTAGTGGGCGAATCCTTAATAGAGCTTCAACAGATCAGAGTACACTGGATACAGACATTCCTTATCAAATTGCTTCATTTGCCTTCGTTGTGATCCAACTTCTGGGAATTATAGCAGTGATGTCTCAGGCTGCATGGCAAGTTTTCGTTGTCTTTATTCCTGTAATCTCAGTCAGCATCTGGTATCAGCAATATTATATTCCATCAGCTCGAGAACTATCACGTTTAGTTGGAGTATGCAAAGCCCCAATCATTCAACACTTTTCTGAAACAGTTTCTGGTACTTCAACCATTAGATGCTTTGATCAGCAATCAAGATTTCAGGAAACAAATATGAAACTGACTGATGGGTATTCTCGACCAAAATTCAACATTGTTGGTGCCGTGGAATGGTTGTGCTTCCGCTTAGATATGTTGTCTTCTATCACATTTGCCTTTTCCTTAATATTCTTAATATCTATTCCACCGGGATTCATAGATCCAGGCCTTGCTGGTTTAGCGGTTACATATGGGCTAAATTTGAACCAGATACAAGCTTGGATGATATGGAATCTCTGCAGTATGGAGAACAAAATTATATCAGTGGAAAGAATACTTCAGTATACTTGTATTCCTAGTGAGCCTCCCCTTGTTGTAGATGAAAATCGGCCAGATCCTTCATGGCCCTCAAATGGCGAGGTTGATATACAAGATTTGCAGGTTCGTTATGCTCCACATCTTCCACTTGTGTTGTGTGGTCTTACGTGCAAATTTCATGGAGGACTGAAAACTGGCATTGTTGGGAGAACAGGAAGTGGTAAATCCACTCTCATACAAACACTTTTCCGAATTGTTGAGCCTGCTGCCGGACAAATTATGATTGACAACATCAACATCTCTTCCATTGGACTTCATGATTTGAGGTCTAGATTAAGCATTATTCCTCAGGACCCAACAATGTTTGAAGGGACAGTAAGAAATAATCTGGACCCCCTGGAAGAATACACTGATGATCAAATTTGGGAGGCCTTGGATAAGTGTCAACTTGGGGAGGAAGTTAGAAAGAAAGAAGGAAAGCTTGACTCGAAAGTTAGTGAGAATGGTGAGAATTGGAGTATGGGTCAGAGACAGTTGGTCTGCCTCGGCAGGGTGCTGCTTAAGAAAAACAAGGTTTTGGTTCTTGATGAAGCCACTGCATCAGTCGATACAGCTACAGATAATTTGATTCAGCAAACTCTTAGGCAACATTTCACTGACTCCACGGTTATTACCATTGCACACAGAATAACTTCGGTTCTTGACAGTGATATGGTTCTGCTTCTTAGTCAAGGACTGATTGAGGAGTATGACACCCCAACAAGGTTGCTAGAGAATAAGTCATCATCTTTTGCTCAACTTGTTGCTGAGTATACCATGAGGTCCAACTCCAGTTTTGAGAAATCTGATGATCACTGA 4512 0.4122 MLSLFLSLSHIHLSNDVLLQPVFLHGLSGFLHFLLLVAVPLSWVRKKLTTRVRDESKEKHDSTLFKTTVFCSLGVSAFSLLLCLFNYFYWYSSSWSEEELVTLLDLALKTVAWGVVCVCLNKGFFSSGERRFSFLFKAWCVLYLFVSCYCFVVDIVVISERRYALPTQYLVSDVVSTCVGLLFCYVGYLVKNKGHVRENENNGIQEPLLNGGTDALRSKETNGGDTVTPFSHAGILSLLTFSWVGPLIAVGNKKTLDLEDVPQLDSTDSIVGAFPGFRDKLEADCGTINSVTTLKLVKSLVMSAWKEILFTAFLALLNTLASYVGPYLIDSFVQYLDGQRLFENQGYVLVCSFFFAMIVECLSQRHWFFRLQQVGLRIRALLVTMIYNKALTLSCQSKQGHTSGEIINFMTVDAERVATFSWYMHDLWMVALQVTLALLILYKNLGLASIAAFVATIIVMLANVPLGSLQEKFQKKLMESKDTRMKATSEILRNMKILKLQGWEMKFLSKITELRKTEQGWLKKFVYTAAMTTFVFWGAPTFVSVVTFSTCMIIGTPLESGKILSALATFRILQEPIYGLPDTISMIVQTKVSLDRIASFLRLDDLPSDVVEKLPRGSSETAIEVVDGNFSWELSSPNPTLQNINIKVFRGMRVAVCGTVGSGKSTLLSCVLGEVPKISGILKVCGTKAYVTQSPWIQSGKIEDNILFGKQKDREKYERVLEACSLKKDLEILPFGDQTIIGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKECLLDLLSSKTVVYVTHQVEFLPAADLILVMKNGKITQCGRYTDLLNSGTDFMELVGAHKKALSTLDSLDGATVSNEISTVEQDLNVSDMQGLKEEEASKNEQNGETDNKSEPKGQLVQEEEREKGKVEFSVYWKCITTAYGGALVPFILLAQILFQALQIGSNYWMAWATPVSTDVEPPVEGTTLIVVYVSLAIGSSFCILARAMLLVTAGYKTATILFNKMHFCIFRAPMSFFDSTPSGRILNRASTDQSTLDTDIPYQIASFAFVVIQLLGIIAVMSQAAWQVFVVFIPVISVSIWYQQYYIPSARELSRLVGVCKAPIIQHFSETVSGTSTIRCFDQQSRFQETNMKLTDGYSRPKFNIVGAVEWLCFRLDMLSSITFAFSLIFLISIPPGFIDPGLAGLAVTYGLNLNQIQAWMIWNLCSMENKIISVERILQYTCIPSEPPLVVDENRPDPSWPSNGEVDIQDLQVRYAPHLPLVLCGLTCKFHGGLKTGIVGRTGSGKSTLIQTLFRIVEPAAGQIMIDNINISSIGLHDLRSRLSIIPQDPTMFEGTVRNNLDPLEEYTDDQIWEALDKCQLGEEVRKKEGKLDSKVSENGENWSMGQRQLVCLGRVLLKKNKVLVLDEATASVDTATDNLIQQTLRQHFTDSTVITIAHRITSVLDSDMVLLLSQGLIEEYDTPTRLLENKSSSFAQLVAEYTMRSNSSFEKSDDH* 1504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01221 1503 SMART AAA_5 1279 1472 IPR003593 GO:0016887
Lapu8g01221 1503 SMART AAA_5 650 823 IPR003593 GO:0016887
Lapu8g01221 1503 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1253 1487 IPR003439 GO:0005524
Lapu8g01221 1503 Gene3D - 1236 1489 IPR027417 -
Lapu8g01221 1503 Pfam ABC transporter transmembrane region 309 576 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lapu8g01221 1503 Pfam ABC transporter transmembrane region 936 1177 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lapu8g01221 1503 SUPERFAMILY ABC transporter transmembrane region 299 609 IPR036640 GO:0005524|GO:0016020
Lapu8g01221 1503 CDD ABCC_MRP_domain1 623 823 - -
Lapu8g01221 1503 FunFam ABC transporter C family member 10 292 605 - -
Lapu8g01221 1503 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 309 589 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lapu8g01221 1503 FunFam ABC transporter C family member 3 1236 1488 - -
Lapu8g01221 1503 Pfam ABC transporter 1273 1418 IPR003439 GO:0005524
Lapu8g01221 1503 CDD ABC_6TM_ABCC_D1 310 597 IPR044746 GO:0140359
Lapu8g01221 1503 FunFam ABC transporter C family member 5 897 1234 - -
Lapu8g01221 1503 MobiDBLite consensus disorder prediction 880 910 - -
Lapu8g01221 1503 Pfam ABC transporter 641 775 IPR003439 GO:0005524
Lapu8g01221 1503 SUPERFAMILY ABC transporter transmembrane region 935 1235 IPR036640 GO:0005524|GO:0016020
Lapu8g01221 1503 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 623 846 IPR003439 GO:0005524
Lapu8g01221 1503 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 621 845 IPR027417 -
Lapu8g01221 1503 Gene3D ABC transporter type 1, transmembrane domain 288 605 IPR036640 GO:0005524|GO:0016020
Lapu8g01221 1503 Gene3D ABC transporter type 1, transmembrane domain 896 1234 IPR036640 GO:0005524|GO:0016020
Lapu8g01221 1503 FunFam ABC transporter C family member 5 608 855 - -
Lapu8g01221 1503 CDD ABC_6TM_ABCC_D2 934 1228 IPR044726 GO:0140359
Lapu8g01221 1503 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 936 1216 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lapu8g01221 1503 Gene3D - 608 862 IPR027417 -
Lapu8g01221 1503 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1244 1484 IPR027417 -
Lapu8g01221 1503 CDD ABCC_MRP_domain2 1251 1471 - -
Lapu8g01221 1503 ProSitePatterns ABC transporters family signature. 748 762 IPR017871 GO:0005524|GO:0016887
Lapu8g01221 1503 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 230 1490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01221 Lapu-Chr8 29862370 29868260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01221 623 853 Calmodulin-binding Proteins AT2G36910 30.709 3.66e-24 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01221 - K05666 gmx:100811245 2598.54