Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01215 ATGAGTGAGATGAGGTTGATGTTATTATCAGGTTTGGTTTTGTTGGTGTTGTTGTTGTTGAAGTGTGTTGGGGTGCAAGGTGATACCGATAGTGATAATGCTAGAAACGTGATTACGTGGGAGGATTTCATGGTGGATGAAAAAGGTACAACATCCAACGTTGGTGGTCGAGTTATCGTGGTCGATCAAAGTGGTAATGGAGATTCAACAACGGTTCAAGGAGCTGTAGATATGGTTCCACAAAACAACACACAGAGGGTCAAGATATACATTTATCCTGGAATTTATAGAGAAAGAGTGCATGTGCCGCAAAGTAAGCCGTTCATTTCATTAATAGGTAAACCTAATATAACAATGAATGCAAATATAACGGCGATAGGGAATGGAATTGGCATGGCTATTATCACAAACAGTACAAAGGCATCAGACAAAGACTCCAACGGCCAAGAAATGGGCACAATTAGTACAGCAACTGTATGGGTACAATCTGATTTTTTCTGCGCAACTGCTCTTACAATTCAGAATTTAGTAGATAAAGATGCAGATAAACGTCAAGCAGTAGCATTGCGCGTAGACGGTGATAAAGCTGTATTCTATGGAGTTAGGCTTGTAGGGGAGCAAGACACCCTCCTTGATAACACAGGCATTCATTATTTCTATCGAAGTTACATTCAAGGATCTGTTGATTTTATATTTGGCAACGCTAAATCGTTGTTTCATGAGTGTGTTCTATACTCTGTAGCTGAGTTGTGGGGAGCAATTGCAGCTCATCACAGGGATTCAGAAGATGAAGATACAGGCTTTTCATTTGTTAACTGCACAATCAAAGGAACTGGTAGTGTCTTTCTTGGGAGAGCATGGGGGGACTATGCAACAACAATATATTCAAATTGTGACATGGATGATGTTATTAATCCCTCGGGATGGAGCGATTGGGATGATCCATCTAGACAAGAGACTGCAATGTTTGGGGAGTATGAGTGTTCAGGAAAAGGATCAAACAGAAGTGAGAGAGTGGAATGGTCAAAAGCTCTAAGCAGAGAAGAAGCTATGGCTTTCGTGAGCAGAGACTACATATATGGAGATGGATGGCTTAGACTATAA 1104 0.4085 MSEMRLMLLSGLVLLVLLLLKCVGVQGDTDSDNARNVITWEDFMVDEKGTTSNVGGRVIVVDQSGNGDSTTVQGAVDMVPQNNTQRVKIYIYPGIYRERVHVPQSKPFISLIGKPNITMNANITAIGNGIGMAIITNSTKASDKDSNGQEMGTISTATVWVQSDFFCATALTIQNLVDKDADKRQAVALRVDGDKAVFYGVRLVGEQDTLLDNTGIHYFYRSYIQGSVDFIFGNAKSLFHECVLYSVAELWGAIAAHHRDSEDEDTGFSFVNCTIKGTGSVFLGRAWGDYATTIYSNCDMDDVINPSGWSDWDDPSRQETAMFGEYECSGKGSNRSERVEWSKALSREEAMAFVSRDYIYGDGWLRL* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01215 367 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 41 366 - -
Lapu8g01215 367 ProSitePatterns Pectinesterase signature 2. 224 233 IPR033131 -
Lapu8g01215 367 FunFam Pectinesterase 54 367 - -
Lapu8g01215 367 Pfam Pectinesterase 59 362 IPR000070 GO:0030599|GO:0042545
Lapu8g01215 367 SUPERFAMILY Pectin lyase-like 56 365 IPR011050 -
Lapu8g01215 367 Gene3D - 57 367 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01215 Lapu-Chr8 29821742 29823962 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01215 12 319 Carbohydrate Esterase AT5G55590 52.711 7.93e-116 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01215 K01051 - gmx:100812850 622.083