Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01214 ATGATGATGATGGAGTTGATGTCTTCCAGAGTTGTGTTCTTGTTTGTGTCGGTTGTCTTGATGTGGGTTCATGTTGATTTAGCAGAAGGTGAAAATGGCCACGGTGGTGTTAGGAACTACATTAGTTGGGAAGATTTGCAGGTGGATGAGCAAAGGTTGACCTTGAAGCGCCATGACGATGTTCGAGTTATTATTGTTAACAAATATGGTGGGGGACATTCCAAAACTGTTCAAGGTGCCGTGGATATGATTCCTGTTAATAACAAACAGAGGGTGAAAATTTACATTTATCCAGGAATTTACAGAGAGAAAGTCCGTGTACCGGTGACCAAGCCTTTTGTATCATTCATAGGGAAAAAAAATCAAACAGCAAGTCCTGTTATAACTTGGAACAGTAAGTCATCTGATAAAGGCACAAATGGCCAGGCATTGGGCACCTTTGATACAGCAACAGTTGGAGTGGACTCAGATTATTTCTGTGCAACTGGAGTCACTTTTGAGAACTCAGTGATTGCAACGGCTGGTGTAAAAGGGATGCAAGGAGTGGCACTGAGGGTGAACAGTGCAAGAGCCATGTTCTATCGAGTGAGGATTAAGGGAGCACAGGACAGTCTCTTGGACAACATAGGAAACCATTACTTCTTAAAGTGTCGCATCCTAGGAAAAGTTGATTTTATCTGTGGCAATGCAAAATCACTCTATGAGAATTGCCGTCTTCAGTCAATAGCTGACAACTTTGGAGCAATAGCAGCACATCATAGGAATTCACCAAATGAAGACACAGGTTTTTCTTTTGTAGGGTGCAGTATTAGAGGAAGTGGCAGAGTATACCTTGGCAGAGCATGGGGAAACTACTCAAGAATTATATACTCAAAATGTAATATGGATGACATTATTATTCCTGAAGGGTGGTCAGATTGGAATCACTCAGATAGAAAGAGGACTGCAGTGTTTGGTGAGTATGAATGCGAGGGAAAAGGAGCAGATAGAAGCAACAGGGCAGCTTGGTCAAAATCATTCAACGATGATGAAGCAACGCCTTTCATTCAGAAGAGTTTCATAGATGGAGACCAGTGGCTGAGACTATAG 1089 0.4215 MMMMELMSSRVVFLFVSVVLMWVHVDLAEGENGHGGVRNYISWEDLQVDEQRLTLKRHDDVRVIIVNKYGGGHSKTVQGAVDMIPVNNKQRVKIYIYPGIYREKVRVPVTKPFVSFIGKKNQTASPVITWNSKSSDKGTNGQALGTFDTATVGVDSDYFCATGVTFENSVIATAGVKGMQGVALRVNSARAMFYRVRIKGAQDSLLDNIGNHYFLKCRILGKVDFICGNAKSLYENCRLQSIADNFGAIAAHHRNSPNEDTGFSFVGCSIRGSGRVYLGRAWGNYSRIIYSKCNMDDIIIPEGWSDWNHSDRKRTAVFGEYECEGKGADRSNRAAWSKSFNDDEATPFIQKSFIDGDQWLRL* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01214 362 FunFam Pectinesterase 59 362 - -
Lapu8g01214 362 Pfam Pectinesterase 64 357 IPR000070 GO:0030599|GO:0042545
Lapu8g01214 362 Gene3D - 60 362 IPR012334 -
Lapu8g01214 362 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 53 361 - -
Lapu8g01214 362 SUPERFAMILY Pectin lyase-like 63 360 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01214 Lapu-Chr8 29815026 29816993 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01214 2 314 Carbohydrate Esterase AT5G55590 52.096 1.17e-119 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01214 K01051 - gmx:100813382 583.948