Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01202 ATGTGCATGTACATGGACATGCTTCTCTTCTTCATCTTCACACTGTTCTTGGGCTCCATGTGTGAGGTGGCAGCCACACAAAACAACCTCAGCCTCCACTTCCCTTCTTTCACTCTCAATAACAACACCATCACCCTTCTCGGCGATGCCTTTCTAAGGACCAACGGTATCGTAACGCTCACCAACGCCGCCTCCACTTCCAGCACCGGCGCCGTCATCTACACCTACCCCATCCTTCTCTTCCACCCTCCAACCGCCACCTTCGCCTCCTTCTCCACCACCTTCTCCTTCTCCATCAACAACCTCAACCCCACCTCCTCCGGCGACGGCCTCGCCTTCTTCCTCTCCCCCAACACCACCGCCACCAACCTCTCCCTCTCCGCCCCACTCGGCCTCCCCTCCTCCTTCGTCGCCGTCGAGTTCGACACGCGCCTTGATTCCTGCTTCGACGACCCCAACGAGAACCACGTCGGCTTCGACGTCGACTCCTTGAAGTCCCTCAAAACCGGTTACCCCATCTTGCACGGCATCGACCTCAAGAGCGGCAACACCATCATCGCATGGATCGACTACAATGCCGATCGAACTCTGCTCACCGTTTTCTTGAGCTATTCACTTTCGAAACCCGTCGACCCCGTCCTCTCCGTTAAGTTCAATCTTTCTCAACACTTGAGAAACCCCGTCTACATTGGATTCTCTGCTTCCACTCAAGGAATTACCGAGATTCACCAAATCCAGAGTTGGACCTTTCACAGTACTTTTGCTCCCGCAAGAACAAGGTTGCACCCTCACAACGTTTCCGTGGTGGGAACTGTTCCTATATCTGGTTCAGGTTCAGGTTCTGGCTCTGGTTCAGGTTCAGGTTCTGGCTCTAGTTCAAGCACTGATTCTTCTTCCAAGAAGCGTGACAAGAGGGTTGGCATTGGTGTGGTTGTTGCGGGTTCTGTCTCTTTCTTTGTGGTTTTTTCAATCTTGGGGTATGTTTTTGTTCGGAGAAGGAGGGGTGGGAGAAAAGAGAAGTTCCAAAATGGTTTCGTGGCGTGTCCCAGGGAATTTGCTTACAAAGAGTTGAAGTCCGCGACAAGAGAATTTCATCCGAGTAGAATTGTTGGGCATGGATCATTTGGGACGGTGTATAAGGCTTTCTTTATCTCTTCTGGAACAATTGCTGCAGTGAAAAGGTCGCGGCACTCTCACGAAGGGAAGATTGAGTTTCTGGCTGAACTCTCCATCATAGCTGGTTTGCGGCACAAGAATTTGGTTCAGCTGCAAGGTTGGTGTGTTGAGAAGGGGGAGTTGTTGCTGGTGTACGACTTTATGCCCAATGGCAGCTTAGACAAGATGCTTTACAAGGAACCTGAAAGGGGGAGGTTGTTGAGTTGGTCTCACAGGGTGAACATTGCTCTTGGGTTGGCCTCTGTGCTGGTTTACCTTCACCAAGAATGTGAGCAGAGAGTGATTCATAGAGACATTAAGGCTGGGAACATATTGCTGGATGGAAACTTGAACCCTAGGTTGGGGGATTTCGGATTGGCAAAGCTGATGGATCATGACAAGAGTCCCGTGTCCACTTTAACTGCTGGAACAATGGGGTACCTTGCACCTGAGTATCTTCAGTATGGAAAGGCCACTGATAAGTCTGATGTTTTCAGCTATGGGGTGGTTGTGCTTGAAGTGGCTTGTGGGAGGAGGCCAATTGAGAGAGAAGGGTCGAAGATGGTGAATCTGATTGAGTGGGTTTGGGGGCTGCACTCGGAGGGGAAGGTGATTGAAGCTGCTGATAAGAGGTTGAATGGGGAATTTGAGGAAGAGGAAATGAGGAAGCTTTTGCTCTTGGGATTGAGTTGTGCTAACCCTGATAGTGCTGAGAGGCCTTCAATGAGAAGGGTGCTTCAGATTCTCAACAATGAGGCTGCACCACTCATTGTGCCAAAAGTTAAGCCAACACTCACCTTCTCTTCTGACCTTCCTCTCACTATTGAGGACATTGTTTCTGATGCTGAAGAGTTCAGTACCAGCCACTCTATGTGTGAGATCAAAATTGACTGA 2049 0.5022 MCMYMDMLLFFIFTLFLGSMCEVAATQNNLSLHFPSFTLNNNTITLLGDAFLRTNGIVTLTNAASTSSTGAVIYTYPILLFHPPTATFASFSTTFSFSINNLNPTSSGDGLAFFLSPNTTATNLSLSAPLGLPSSFVAVEFDTRLDSCFDDPNENHVGFDVDSLKSLKTGYPILHGIDLKSGNTIIAWIDYNADRTLLTVFLSYSLSKPVDPVLSVKFNLSQHLRNPVYIGFSASTQGITEIHQIQSWTFHSTFAPARTRLHPHNVSVVGTVPISGSGSGSGSGSGSGSGSSSSTDSSSKKRDKRVGIGVVVAGSVSFFVVFSILGYVFVRRRRGGRKEKFQNGFVACPREFAYKELKSATREFHPSRIVGHGSFGTVYKAFFISSGTIAAVKRSRHSHEGKIEFLAELSIIAGLRHKNLVQLQGWCVEKGELLLVYDFMPNGSLDKMLYKEPERGRLLSWSHRVNIALGLASVLVYLHQECEQRVIHRDIKAGNILLDGNLNPRLGDFGLAKLMDHDKSPVSTLTAGTMGYLAPEYLQYGKATDKSDVFSYGVVVLEVACGRRPIEREGSKMVNLIEWVWGLHSEGKVIEAADKRLNGEFEEEEMRKLLLLGLSCANPDSAERPSMRRVLQILNNEAAPLIVPKVKPTLTFSSDLPLTIEDIVSDAEEFSTSHSMCEIKID* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01202 682 CDD STKc_IRAK 370 636 - -
Lapu8g01202 682 Gene3D Phosphorylase Kinase; domain 1 329 439 - -
Lapu8g01202 682 Gene3D - 28 258 - -
Lapu8g01202 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 486 498 IPR008271 GO:0004672|GO:0006468
Lapu8g01202 682 PANTHER - 47 644 - -
Lapu8g01202 682 ProSitePatterns Protein kinases ATP-binding region signature. 370 393 IPR017441 GO:0005524
Lapu8g01202 682 Pfam Legume lectin domain 30 258 IPR001220 GO:0030246
Lapu8g01202 682 Pfam Protein kinase domain 365 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01202 682 MobiDBLite consensus disorder prediction 276 296 - -
Lapu8g01202 682 CDD lectin_legume_LecRK_Arcelin_ConA 30 254 IPR001220 GO:0030246
Lapu8g01202 682 MobiDBLite consensus disorder prediction 276 301 - -
Lapu8g01202 682 Gene3D Transferase(Phosphotransferase) domain 1 440 642 - -
Lapu8g01202 682 ProSiteProfiles Protein kinase domain profile. 364 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01202 682 SMART serkin_6 364 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01202 682 SUPERFAMILY Concanavalin A-like lectins/glucanases 30 255 IPR013320 -
Lapu8g01202 682 FunFam L-type lectin-domain containing receptor kinase VIII.1 440 652 - -
Lapu8g01202 682 SUPERFAMILY Protein kinase-like (PK-like) 347 658 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01202 Lapu-Chr8 29758480 29760777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01202 7 669 Receptor kinase-like Gene Family AT5G55830 55.540 0.0 705
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lapu8g01202 Pkinase 7.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01202 - - gmx:102668712 971.459