Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01190 ATGGAGAATGAAAGAGAAGATGAGATTGAGGACATGTCAATGTCACCCCCATCTCTGGGCTCCATGCAATTTGCAGGGAGCAATGGCTTTGGTCACAGCATGGAGTTCATGTCTCAGGCATACCTTCCGAATATGTACACAGAGATTGACATAAAAGTTGAGGATTCCGATTACAACCAAGATCCCCCCCTTCCCATTTATCTCAAGTTTGAAGATGTAGAGTACAAGGTGAGAAGTAGCCAAGCGGCTTCCAATAATCCTGTGAAGTCAGTGATGTCAAAAGTTGCCACACAGCACAACGTGGAAGAAGATAGATACAAGGAAATTTTGAAGGGTATGACAGGAAGCATTGGCCCTGGTGAAATTCTTGCTTTGATGGGTCCTTCTGGTAGTGGGAAGACAACCTTGTTGAGAGTTGTAGGAGGAAGATTAGTTGACAATGTAAAGGGAAAGATAACTTACAACGACGTTCGATTCAATCCATCCGTCAAGAGGAGGATTGGCTTTGTTACGCAAGAGGATGTGCTTTTCCCACAACTTACAGTAGAGGAAACATTAATCTTCTCTGCATTCTTAAGGTTGCCAAGCAATATGAGCGAGCAACAAAAATATGCAAGAGTGGAGAACACTATCAAGGAGCTAGGCCTTGAAAGATGTCGCCACACAAAAATAGGTGGAGGATATCTCCAAAGCATCTCTGGAGGAGAAAGGAAGCGAACCAGCATAGGCTATGAAATCCTCGTTGATCCTTCGCTGCTTCTACTTGATGAACCAACTTCAGGCCTTGATTCCACAGCAGCAAACAGACTCCTTCTCACTCTTCAGGGACTTGCCAAGGGTGGAAGGACCATAATCACAACAATTCACCAGCCATCCAGCAGAATCTTTCACATGTTTGACAAACTTCTTCTTATATCAGAAGGATACCCCGTTTACTATGGGAAGGCCAAGGACTCAATGCAGTACTTTTCATCCTTGAGGTTCACCCCGGAAATACCAATGAATCCTGCAGAATTCATGCTTGACTTGGCAACTGGACAAGTGAATAACATAAGCTTTCCACAAGATACTTTCAAAGATCAAGAATCTGCTGACCATTCAAAATCTGTTATTAAATATCTACAACTCAAATATAAAGAAACACTGGAACCAAGAGAAAAAGCAGAGAATCACGGAGCAGCAAACACACCAGAACATCTTCAGCTAGCCATTCAGGTTAAAAAGGACTGGGCAGTGAGTTGGTTGGACCAATTCTTTATTCTTTACAAGAGAACATTCAGAGCAAGATGCAAGGACTATTTTGATAAATTAAGATTAGTTCAAGCACTTGGCATTGCTCTTTTGTTGGGGCTACTTTGGTGGAAATCTTCAACCAATACAGAGGCTCAAGTTAGAGATCAGGTTGGTTTAATGTTCTATATCTGTATATTCTGGACATCTTCATGTATTTTTGGAGCAGTCTATGTCTTTCCATTTGAAAAGGTCTATTTGGTGAAAGAAAGGAAAGCAGATATGTATAGACTGAGTGTATACTATGTAAGCAGCACTCTGTGTGATATGGTGGCGCATGTTTTTTACCCTACTTTTTTCATGCTTATCTTGTACTTCATGGCTGGATTTAAGAGGACTGTTGCTTGCTTCTTCCTGACTTTGTTCGCGGTGCTGTTAATAGCTATAACAAGTCAAGGGGCAGGAGAACTATTTGGAGCTGCAGTTATGAGCATTCAAAGAGCAGGGATAATTGCTTCTTTGATACTAATGTTGTTCCTTCTCACCGGTGGCTACTATGTCCAGCACGTACCGAAGGTGATGCAGTGGTTGAAGTATTTGTCATTCGTGTACTATGGATTCAGACTTCTTCTAAAAGTGCAATATTCAGGAGAGCAACTATATGAGTGTGAAAGTGAAAGAGGGTGCAGGACACTGCAGAGTTCACCATCATTTGACACAGTAAATTTGCAAGGAGGCTTAACTGAAGCATGGATTCTGGTAGCCATGGCTCTATGCTTCCGAATCTTTGCCTACTTCTGTCTCCGCAGAAGAATTGACGTTCGCAATTAG 2061 0.4207 MENEREDEIEDMSMSPPSLGSMQFAGSNGFGHSMEFMSQAYLPNMYTEIDIKVEDSDYNQDPPLPIYLKFEDVEYKVRSSQAASNNPVKSVMSKVATQHNVEEDRYKEILKGMTGSIGPGEILALMGPSGSGKTTLLRVVGGRLVDNVKGKITYNDVRFNPSVKRRIGFVTQEDVLFPQLTVEETLIFSAFLRLPSNMSEQQKYARVENTIKELGLERCRHTKIGGGYLQSISGGERKRTSIGYEILVDPSLLLLDEPTSGLDSTAANRLLLTLQGLAKGGRTIITTIHQPSSRIFHMFDKLLLISEGYPVYYGKAKDSMQYFSSLRFTPEIPMNPAEFMLDLATGQVNNISFPQDTFKDQESADHSKSVIKYLQLKYKETLEPREKAENHGAANTPEHLQLAIQVKKDWAVSWLDQFFILYKRTFRARCKDYFDKLRLVQALGIALLLGLLWWKSSTNTEAQVRDQVGLMFYICIFWTSSCIFGAVYVFPFEKVYLVKERKADMYRLSVYYVSSTLCDMVAHVFYPTFFMLILYFMAGFKRTVACFFLTLFAVLLIAITSQGAGELFGAAVMSIQRAGIIASLILMLFLLTGGYYVQHVPKVMQWLKYLSFVYYGFRLLLKVQYSGEQLYECESERGCRTLQSSPSFDTVNLQGGLTEAWILVAMALCFRIFAYFCLRRRIDVRN* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01190 686 Pfam ABC-2 type transporter 417 625 IPR013525 GO:0016020|GO:0140359
Lapu8g01190 686 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 324 IPR027417 -
Lapu8g01190 686 SMART AAA_5 119 310 IPR003593 GO:0016887
Lapu8g01190 686 CDD ABCG_EPDR 65 314 - -
Lapu8g01190 686 Pfam ABC transporter 110 260 IPR003439 GO:0005524
Lapu8g01190 686 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 68 332 IPR003439 GO:0005524
Lapu8g01190 686 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 55 672 - -
Lapu8g01190 686 Coils Coil 197 217 - -
Lapu8g01190 686 Gene3D - 95 327 IPR027417 -
Lapu8g01190 686 FunFam ABC transporter G family member 22 97 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01190 Lapu-Chr8 29659661 29663061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01190 108 293 Calmodulin-binding Proteins AT2G36910 30.366 5.35e-13 70.9