Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01188 ATGAATTCTAGGTGCTTCCTTCATCCACAACAAGACTTTAGCATGGTTCTATTTTCTTCAAATTCTGCCACAGAAGATAGAGTGGCTACTGCTCGAAACAGGTCTCCACGTGTCACCCCTCCTTCCTTTTTGGTTCGGGTGGCCATGAGAATATCTAGAGCAAGATGGTTTAGCTTTTTGAGAAGAGTTTTTCATTACCAAAATGGATCAAGGTCCAATCTTGGCTCCAACCCTTTCAATTCTAGCACTTGGATGATGCTGGAGTTTATTGCCTTGATTGTCCAAATAACCATTACAACATTCACTTTGGCCATTTCCAAGAGGGAGAGACCTATTTGGCCTATGAGGATATGGATTTCTGGTTATGATATTGGTGTTGTTCTTAATCTGCTGCTACTTTATGGGCGCTACCGTCAAATTTATCTCACACAAGGAGATGCTCTCGCCCTTTCTGATATAGAACAGCAGAGAAACCATGAAGAAACCAGTGTGTACAGGATGTCACACTTAATGAATAAATGTCGGACTTCACTTGAGCTTTTCTTCGCCATATGGTTTGTGATGGGAAATGTTTGGGTTTTTGACTCACGTTTTGGATCTTTTCATCAAGCTCCAAAACTCCATGTGCTCTGCATCACTCTTCTTGCTTGGAATGCATTGTGCTACTCTTTCCCTTTTCTACTGTTTGTGTTGCTATGCTGCTGTGTACCACTGATTAGCACCCTCCTTGGATACAACATGAATATAGCCTCTTTCGATAAAGGAGCTTCTGATGATCAAATTTCACAACTTCCAAGTTGGAAACATAAAGAAGGTCGTGCCAAGTTAGAGCTTGGAAATGACTCCGAAGAGAGTGAAAAACTGATGGATGAAGACCAAGAATGTTGTATCTGCTTGGCCAAGTATAAAGACAAAGAGGAAGTTAGACAATTGCCCTGTTCCCATATGTTCCATCTAAAGTGTGTGGATCAATGGCTAAAAATTACATCATGCTGTCCTCTTTGCAAGCAAGGATTAGAAATCTAG 1026 0.4113 MNSRCFLHPQQDFSMVLFSSNSATEDRVATARNRSPRVTPPSFLVRVAMRISRARWFSFLRRVFHYQNGSRSNLGSNPFNSSTWMMLEFIALIVQITITTFTLAISKRERPIWPMRIWISGYDIGVVLNLLLLYGRYRQIYLTQGDALALSDIEQQRNHEETSVYRMSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFHQAPKLHVLCITLLAWNALCYSFPFLLFVLLCCCVPLISTLLGYNMNIASFDKGASDDQISQLPSWKHKEGRAKLELGNDSEESEKLMDEDQECCICLAKYKDKEEVRQLPCSHMFHLKCVDQWLKITSCCPLCKQGLEI* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01188 341 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 245 340 IPR013083 -
Lapu8g01188 341 ProSiteProfiles Zinc finger RING-type profile. 295 336 IPR001841 -
Lapu8g01188 341 SMART ring_2 295 335 IPR001841 -
Lapu8g01188 341 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 19 338 - -
Lapu8g01188 341 SUPERFAMILY RING/U-box 286 339 - -
Lapu8g01188 341 Pfam Ring finger domain 294 336 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01188 Lapu-Chr8 29645930 29649147 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01188 43 339 C3H Transcription Factor Family AT4G26580 70.805 2.15e-149 422