Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01185 ATGTCTGTAAGCTTAAGGAATCACTCACTTCCTCCCAAAATCTTCTCCCTCACCTTGCTTCTTTGTTTAAACTCTCTTTTGTTTCCTTGCTGTTACTCCCAGCTTAATGAGCAAGGCCAAGCTCTTTTAGCATGGAAAAACAGTTTAAACAGTACTGCAGATGCATTGGCATCTTGGAATCCTTCCAGCCCAAGTCCATGCAATTGGTTTGGGGTGCGCTGCAACTTACAAGGAGAGGTGGTTGAGATAAACCTGAAGTCAGTGAACTTGCAAGGCTCACTACCTTCAAATTTTCAACCTCTCAGGTCCTTGAAGATTCTTTCCCTCTCAACAACCAACATCACAGGCAGGATTCCGAAGGAGATTGGAGACTATAAAGAGCTCATTTTCATTGATCTCAGTGGCAATTCTCTCTTTGGTGAAATTCCAGAAGAAATTTGCAGGTTGAGCAAACTGCAGACTTTAGCTCTGCACGCCAACTTTCTTGAAGGCAACATTCCATCCAACATAGGAAATTTATCAAGTCTCGTAAACTTGACACTCTATGACAACAAATTGAGTGGCGAAATTCCAAATAGTATTAGCTCTTTAACTGAGCTCCAAGTGTTGAGAGTAGGAGGGAACACAAACCTTAAGGGTGAGGTGCCATGGCAAATTGGAAACTGCACCAACTTGGTGGTTTTAGGCCTTGCAGAAACCAGCATTTCTGGGAATCTTCCTTCTTCAATAGGGATGCTGAAAAGAATTCAGACCATAGCCATTTACACGACTCTGCTGTCAGGCTCTATACCAGAAGAGATAGGGAAGTGCAGTGAGTTGCAGAACCTGTACTTGTATCAGAACTCAATTTCTGGTTCAATCCCAAGTCAAATTGGAGAGCTCAGCAAGCTTCAGAATCTTCTCTTATGGCAAAACAATATAGTAGGGACAATCCCAGAAGAACTTGGAAGCTGCACTCAACTGGAAATCATAGACCTATCAGAAAATCTTCTCACAGGTAGCATACCGATCAGTTTTGGTAAGCTACCAAATCTGCAAGGGCTTCAACTGAGTGTTAATAAGCTTTCAGGCCTTATACCTCCTGAAATCGCAAATTGCGCTTCCCTGACTCAACTGGAAGTTGACAATAATGCTATTTCTGGAGAGATTCCTCCTGTCATTGGCAACTTGAGAAGCTTGACTCTCTTCTTTGCATGGCAGAACAAGCTCACGGGAAAAATCCCAGATAGTCTTTCACAGTGCCAAGATCTTCAGGCACTTGATCTCTCTTACAACAATTTAACTGGTCCAATCCCCAAACAAATTTTTGAGCTGAGGAACCTCACTAAACTGCTGCTTCTTTCCAATGATTTGACCGGATTTATACCACCTGAGATAGGTAACTGCACAAGCCTCTACAGGTTGAGGTTAAATCACAATAGACTGTCAGGTACCGTTCCATCTGAAATCACCAACTTGAAGAATTTGAACTTTTTGGACGTGAGCAGCAATCATCTTGTAGGGGAAATTCCTCCTACACTATCCAGATGCCAAAATCTTGAGTTTCTGGACCTCCACTCAAACAGTCTCATTGGCTCAGTTCCAAACAATCTGCCCAAAAACCTGCAGTTAATGGACCTCTCAGACAACAGGCTAACAGGTGAACTGAGCCATTCTATTGGTTCATTAACTGAGTTAGCCAAACTGAACTTGGGAAAGAATCAACTCAGAGGAAGCATCCCTGCAGAGATCCTGTCTTGCTCCAAGTTACAACTTCTGGACTTGGGAAGCAATAGTTTTTCTGGAGAAATTCCTAAGGAAGTTGCTCAAATTCCTTCACTAGAAATCCTTCTCAATCTTAGTTGTAACCAGTTTTCTGGCGAAATCCCATCCCAGTTCTCCGGTCTTAGAAAACTTGGAAGCCTTGACCTCTCCCACAACAAGCTCTCAGGGAAGTTGGATGCTCTCTCTGACCTTCAAAACCTTGTTTCGTTAAATGTTTCCTTCAATGACTTCACAGGAGAATTGCCTAAGACCCCATTCTTCAGGAAACTCCCTCTCAGTGATCTCACAGGAAATGATGGCCTGTACATTGTTGGTGTTGTAACTCCAGCTGACAGAAAGGAAGCCAAGGGTCATGCCAGGTTGACTATGAAGATTATAATGTCCATTCTCTTAAGCACCAGTGCAGTACTTGTACTGCTCACAATCCATGTCTTGGTTCGTGCTCACGTTTCTAACAAAGTACTCATTGGAAACAACAATTGGGTGATAACTTTGTATCAGAAGTTTGAATTCTCTGTTGATGATATTGTCCGTAATTTGACATCATCCAATGTGATTGGCACTGGAAGCTCTGGAGTTGTGTACAAGGTTACAGTTCCAAGTGGCCAAACACTAGCAGTTAAAAAGATGTGGTCATCGGCAGAGTCGGGAGCATTTACTTCTGAAATTCAAACACTGGGTTCAACTAGACACAAGAACGTCATCAAGCTTCTGGGTTGGGGGTCCAGCAAGAACATGAAGCTGCTGTTTTATGAGTACCTCCCTAATGGAAGCCTGAGCTCATTACTTCATGGTTCAGGAAAGGGAAAAGCAGAATGGGAGACCAGATATGATGTTATGGTAGGAGTGGCTAATGCACTTGCATATTTGCACCATGATTGTGAGCCTTCCATATTGCATGGAGATGTCAAAGCCATGAACGTGTTGTTAGGTCCTGGCTATCAGCCTTACCTTGCTGACTTTGGCCTAGCTAGAATTGCAAGTGAAAATGGTGATTCTTCTAATTCCAAGCCAGTTCAAAGACCCTACCTTGCTGGCTCCTACGGGTACATGGCTCCAGAACACGCATCTATGCAGAAGATCACTGAGAAGAGTGATGTGTACAGTTTTGGTGTGGTCCTACTTGAGGTCCTGACAGGAAGGCACCCCTTAGACCCAACACTTCCTGGGGGTGGTGCACACTTGGTTCAGTGGGTTAGGAACCACTTAGCAAGCAAAGGAGACCCATCTGACATTCTTGACCCAAAACTGAGAGGGAGAACTGATTCCGCTCTGCATGAAATGCTACAAACTCTAGCTGTGTCATTTCTATGCGTCAGTACCCGGGCTGAGGACCGTCCAACAATGAAGGACACTGTTGCAATGCTGAGGGAAATTCGACTTGTTGAAGCCCCAACCGCAGGTCCTGATGCATTGAAGGGAGTTTCAACAGTGCATGCTTCTCATCACATCTTAAAAAAGTAG 3228 0.439 MSVSLRNHSLPPKIFSLTLLLCLNSLLFPCCYSQLNEQGQALLAWKNSLNSTADALASWNPSSPSPCNWFGVRCNLQGEVVEINLKSVNLQGSLPSNFQPLRSLKILSLSTTNITGRIPKEIGDYKELIFIDLSGNSLFGEIPEEICRLSKLQTLALHANFLEGNIPSNIGNLSSLVNLTLYDNKLSGEIPNSISSLTELQVLRVGGNTNLKGEVPWQIGNCTNLVVLGLAETSISGNLPSSIGMLKRIQTIAIYTTLLSGSIPEEIGKCSELQNLYLYQNSISGSIPSQIGELSKLQNLLLWQNNIVGTIPEELGSCTQLEIIDLSENLLTGSIPISFGKLPNLQGLQLSVNKLSGLIPPEIANCASLTQLEVDNNAISGEIPPVIGNLRSLTLFFAWQNKLTGKIPDSLSQCQDLQALDLSYNNLTGPIPKQIFELRNLTKLLLLSNDLTGFIPPEIGNCTSLYRLRLNHNRLSGTVPSEITNLKNLNFLDVSSNHLVGEIPPTLSRCQNLEFLDLHSNSLIGSVPNNLPKNLQLMDLSDNRLTGELSHSIGSLTELAKLNLGKNQLRGSIPAEILSCSKLQLLDLGSNSFSGEIPKEVAQIPSLEILLNLSCNQFSGEIPSQFSGLRKLGSLDLSHNKLSGKLDALSDLQNLVSLNVSFNDFTGELPKTPFFRKLPLSDLTGNDGLYIVGVVTPADRKEAKGHARLTMKIIMSILLSTSAVLVLLTIHVLVRAHVSNKVLIGNNNWVITLYQKFEFSVDDIVRNLTSSNVIGTGSSGVVYKVTVPSGQTLAVKKMWSSAESGAFTSEIQTLGSTRHKNVIKLLGWGSSKNMKLLFYEYLPNGSLSSLLHGSGKGKAEWETRYDVMVGVANALAYLHHDCEPSILHGDVKAMNVLLGPGYQPYLADFGLARIASENGDSSNSKPVQRPYLAGSYGYMAPEHASMQKITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGGAHLVQWVRNHLASKGDPSDILDPKLRGRTDSALHEMLQTLAVSFLCVSTRAEDRPTMKDTVAMLREIRLVEAPTAGPDALKGVSTVHASHHILKK* 1076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01185 1075 ProSitePatterns Serine/Threonine protein kinases active-site signature. 886 898 IPR008271 GO:0004672|GO:0006468
Lapu8g01185 1075 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g34110 194 285 - -
Lapu8g01185 1075 FunFam Putative LRR receptor-like serine/threonine-protein kinase 753 841 - -
Lapu8g01185 1075 FunFam Leucine-rich receptor-like protein kinase family protein 35 193 - -
Lapu8g01185 1075 Pfam Leucine rich repeat 320 379 IPR001611 GO:0005515
Lapu8g01185 1075 Pfam Leucine rich repeat 611 665 IPR001611 GO:0005515
Lapu8g01185 1075 PANTHER UNNAMED PRODUCT 19 529 - -
Lapu8g01185 1075 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 842 1061 - -
Lapu8g01185 1075 Gene3D Ribonuclease Inhibitor 611 695 IPR032675 -
Lapu8g01185 1075 Gene3D Transferase(Phosphotransferase) domain 1 842 1055 - -
Lapu8g01185 1075 SMART LRR_typ_2 149 173 IPR003591 -
Lapu8g01185 1075 SMART LRR_typ_2 101 125 IPR003591 -
Lapu8g01185 1075 SMART LRR_typ_2 629 652 IPR003591 -
Lapu8g01185 1075 SMART LRR_typ_2 438 462 IPR003591 -
Lapu8g01185 1075 SMART LRR_typ_2 486 510 IPR003591 -
Lapu8g01185 1075 SMART LRR_typ_2 294 318 IPR003591 -
Lapu8g01185 1075 SMART LRR_typ_2 342 366 IPR003591 -
Lapu8g01185 1075 SMART LRR_typ_2 556 580 IPR003591 -
Lapu8g01185 1075 Gene3D Ribonuclease Inhibitor 368 610 IPR032675 -
Lapu8g01185 1075 SUPERFAMILY RNI-like 82 428 - -
Lapu8g01185 1075 Gene3D Phosphorylase Kinase; domain 1 739 841 - -
Lapu8g01185 1075 ProSiteProfiles Leucine-rich repeat profile. 631 653 IPR001611 GO:0005515
Lapu8g01185 1075 FunFam Putative LRR receptor-like serine/threonine-protein kinase 610 694 - -
Lapu8g01185 1075 Pfam Leucine rich repeat N-terminal domain 36 75 IPR013210 -
Lapu8g01185 1075 ProSitePatterns Protein kinases ATP-binding region signature. 774 797 IPR017441 GO:0005524
Lapu8g01185 1075 Gene3D Ribonuclease Inhibitor 299 367 IPR032675 -
Lapu8g01185 1075 SUPERFAMILY Protein kinase-like (PK-like) 759 1044 IPR011009 -
Lapu8g01185 1075 Gene3D Ribonuclease Inhibitor 35 190 IPR032675 -
Lapu8g01185 1075 Gene3D Ribonuclease Inhibitor 191 289 IPR032675 -
Lapu8g01185 1075 SMART LRR_sd22_2 532 558 - -
Lapu8g01185 1075 SMART LRR_sd22_2 486 515 - -
Lapu8g01185 1075 SMART LRR_sd22_2 270 296 - -
Lapu8g01185 1075 SMART LRR_sd22_2 173 199 - -
Lapu8g01185 1075 SMART LRR_sd22_2 318 339 - -
Lapu8g01185 1075 SMART LRR_sd22_2 629 654 - -
Lapu8g01185 1075 SMART serkin_6 768 1017 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01185 1075 SUPERFAMILY RNI-like 335 671 - -
Lapu8g01185 1075 Pfam Protein kinase domain 771 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01185 1075 FunFam Leucine-rich receptor-like protein kinase family protein 337 609 - -
Lapu8g01185 1075 PRINTS Leucine-rich repeat signature 417 430 - -
Lapu8g01185 1075 PRINTS Leucine-rich repeat signature 629 642 - -
Lapu8g01185 1075 ProSiteProfiles Protein kinase domain profile. 768 1049 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01185 Lapu-Chr8 29626267 29630046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01185 31 1062 Receptor kinase-like Gene Family AT5G56040 65.929 0.0 1366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lapu8g01185 Pkinase 1.7e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01185 - - gmx:100813139 1890.16