Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01163 ATGTCTTCTACTTCTTCTTCTTCTTCTTCCTCGTCATCATCATCATCATCAACTTCAACCCCATATGACGCTGTTGCTCCTGATATTCCTGGCCCTAGTACGAGGAGAACCGGTCAATTTGAAGGTCCTTCCTCCTCTCGTCAACGTGCTATGAATGAGGTCTTGCCTGAGCCTTTTCTTGAAGCCTTGGCCAACCAACTTGCCCTTGATGCTGCCAACTACAATGGACGTCTTGCTGCTGCTCCTGCCCTTGCCAATTTGTTTCAGGTTTGTTCCACGTGGCGGGAGGTGTCGCGCTCGGATATGCTGTGGGAGCACCTCACGAGGCGCATCTGGCGAAGGTCGTTCCGAGTGCGGGACACGTGGCACAACGAGTTCATCAACTGGCATCGGACGGCTAGGAACTTCGAGACCGGGAGCGTGTCGTTTTCGAACCCGCAGTTTGATCCCTCGGAACATCGCCAGAGCTTGATCTGCCGCTGCCTCACCCTTTCCGACACGCTCCTTGCGTGCGGCTTCGTCGACGGCACCGTGCGCGTCTTCGACCTCGAAACCCGGGACCACGTCAGCACCTTCCTGTCCGACCACGGCCACCTCTTCGGGCCCTTCTCGCGCTCCGTCTCGGGAATCGTTATCACGGAGTCGGACATCACCTTTGCAAGGCTGGACGGGGATATCTACGTGGACGATATCAACATGCATGGCCAGAGTCAAGCGCGGCGGGCCGTGTCGGGGTTCGTGATGAACAACGGGGTGTTGGTTGGGTTCGCGGGAACGGCGCGGTGGTGGGTGGGTCTGTTCGCGGGGATAGCGGGCCGGGCCTTTCAGGTGTGGAATGCGGCGACCGGGGAGCGCGTGTTCGTTGGGGGGTCGTTGACCGATCCGGAAACGGTTATGGGGTGGCACATGCTGACGGAGTTGGTTGACCCAGTGGGGCGCGTGCGGATGACGGAGGGTGAGTTTGTGGTGGCTTGCACTGGTTTGAGGCTGATCTGTTTCAATGCTTGGAACCCGGAGGTTGTGCTGCGGGACGTGGGGTCGGCGTCGGGGTTCGTGGTGAGTTCGATGGACGTGAGCGAGGAGGCGTTTGTTGTGGTGGAGCGTGGCGGGGTGGGAACGGTGTGGCGCGTGGGGACGTTGGAGTTGATGAGCCGGTTTAGGTTGAGGAGTTCGTGGGTTCGGGGGTTGTGGGGTTGCATGAACCTTGGGTACGTGTTAACCTATTCTCCTAACCCTGCACCTTTCTTGAGGGTTTGGAACATTGAGCAAGAGGAAGGACGGTTGTGTGTGAGAGTGTTCCTGAGAGCAGGGGAAGTGAGCAGCATGGTTGCTAATGATACACACGTGGCTATCTCCTCCAATAATATTAACTTATTGGATTTTGGTGTACAGGATCCTTAG 1401 0.5739 MSSTSSSSSSSSSSSSSTSTPYDAVAPDIPGPSTRRTGQFEGPSSSRQRAMNEVLPEPFLEALANQLALDAANYNGRLAAAPALANLFQVCSTWREVSRSDMLWEHLTRRIWRRSFRVRDTWHNEFINWHRTARNFETGSVSFSNPQFDPSEHRQSLICRCLTLSDTLLACGFVDGTVRVFDLETRDHVSTFLSDHGHLFGPFSRSVSGIVITESDITFARLDGDIYVDDINMHGQSQARRAVSGFVMNNGVLVGFAGTARWWVGLFAGIAGRAFQVWNAATGERVFVGGSLTDPETVMGWHMLTELVDPVGRVRMTEGEFVVACTGLRLICFNAWNPEVVLRDVGSASGFVVSSMDVSEEAFVVVERGGVGTVWRVGTLELMSRFRLRSSWVRGLWGCMNLGYVLTYSPNPAPFLRVWNIEQEEGRLCVRVFLRAGEVSSMVANDTHVAISSNNINLLDFGVQDP* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01163 466 SUPERFAMILY F-box domain 83 131 IPR036047 GO:0005515
Lapu8g01163 466 PANTHER WD40 REPEAT PROTEIN 12, 37 7 431 - -
Lapu8g01163 466 MobiDBLite consensus disorder prediction 1 49 - -
Lapu8g01163 466 MobiDBLite consensus disorder prediction 1 23 - -
Lapu8g01163 466 SUPERFAMILY WD40 repeat-like 152 454 IPR036322 GO:0005515
Lapu8g01163 466 Gene3D - 137 463 IPR015943 GO:0005515
Lapu8g01163 466 Gene3D - 45 136 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SAP Lapu8g01163 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01163 - - gmx:100807240 675.241