Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01160 ATGGAAGCAAACAAGGAGGAAGCACTTAAAGCGATAGAGATTGCTGAAAAGCGATTTGCTGTGAGGGACTTTGCAGGTGCGAAAAACTATGCTGTAAAGGCTAGAACACTTTGTCCGGGATTGGAGGGTATATCTCAAATGGTGGCCACATTTGAAGTTTACGTTGCTTCTGAGGTCAAACATAATGGTGATCTAGATTACTATTCGATTCTTGGATTAAAGCCTTTTGCCGATAAGGAGGCTGTGAAGAAACAATACAAGAAGTTGGCGGTGTTGCTACACCCAGATAAGAACAAGTGTGTGGGAGCTGACGAGGCATTTAAGCTTGTTTCTGAGGCTTGGACTTGGCTATCAGACAGTGCTATGCGCAGTTCTTATGATCTCAAGAGAAATGCACAGTTGGGCGGGACTAACCAGATGAATTTGTCTCCTGCCCATGCTACAGGGGCTGCAGGTTATAACAAATGTTCCAATTTGTCAACCCCTCGTGGTAGGCTTGACACCTTTTGGACAATCTGCACCTCTTGTAATGTTCAGTACGAGTACCTGCGCAAGTACGTGAATAAAAGACTCTCTTGTAAGAACTGCCGTGGCACTTTTGTAGCTGTTGAAACTGGGGCGGCCCCTGCAAACGGTTCATTTCCATATTGTCCTTGGTCATATGTGCCAGGAAATGGGTATGGAAGTCATTCATTTGATGGTGTCTCGTATGTTCCAACTAGTGCCCCCTATTTCAATGGGAATGGGGTTGCAGGATACCATTCTGGACATGGATATGAGTACGTTCCAAATGTTTCATTTCAGTGGGGCTCTGCTGGAGTTGTCAATCAGAATGGATCAACTACCTTACCTGCTGATTCTGTCAATCGGGCCAACGGAAATGTGAAGAGGGGAAGGCCAAAAATCAAAACAGGAGCTGATAAGAGGTATCATGTGGCAGAGACTGTGGTCAATACAAATTCAGATGTACCATTCTCCTGTAGTGACCCACAGGAAGATAAACTAAGTAGACCTGACAAGAAACAGAAAGTTGTTGTAGGAGCCACTTTCAGAAATGGCTATGAAGAAAAGGGTTCAAAATATGCTCTAGAGTCAATAGTGTCCAACGGAAATGATAGCACTGGACATGGCCAAAAGCCTTTCTGCACAGTTGAAGTTCAAACCAAACAGTGTTCCATGGCACCAGCATTCGATGCAAGAAAATTATTGATTGAGAAAGCCAGGACAGAAATCAGGAAGAAACTGGAGGAGATGAAGCTGTCATCTGAAGCAGCAGTAGCAGCGGCTGCAGCTCTGAAAGAGAGAGAAAAATCACAAGCTGAAGTTGGTCAAGTAAAAAGAGAGACATGTAGAAAAACAGCCCTGAATGTGTCTGGTCTACAGCTGGAGAATGGGAAAACTGGTCCAATCTCAATTACTGTCCCAGATTCTGACTTTCATGACTTCGATAAAGATAGGTCAGAAGAATGCTTCAGGCCAAAGCAAATATGGGCCCTGTACGATGAGGAAGATGGAATGCCCCGGTTGTATTGTATGATCCGTGAGGTTGTGGCTGTCAATCCATTTAAGATTCTAATCAGTTACTTGAGTTCCAAAACTGATACTGAGTTTGGCTCAGTAAACTGGCTTGATTCAGGTTTCACCAAATCTTGTGGAAATTTCAGGGCTTTTAATTCAGATGTTGTTGATCAAGTTAACATATTTTCTCATGTTCTAAGTCAGGAGAAGGCTGGTCGAGGGGGTTGCGTTCGCATATATCCCAGAAGTGGAGATATTTGGGCTGTGTATCGAAATTGGTCACCAGATTGGAACAGATCTACCCCAGATGAAGTGAGGCATCAGTATGAAATGGTTGAGGTGCTGGATGATTACTCTGAGGAACTTGGTGTTTGTGTCAGTCCCCTTGTTAAGTTGGCTGGATATAAAACAGTATATCAGAGTAATACCGACAAGAGTGCCATAAAATGGATACCCAAAAGAGAGATGTTGCGCTTTTCACATCAAGTGCCTTCTTGGTTGCTGAAGGGGGAGGCTGAGAATTTGCCAGAAAGGTGTTGGGACCTGGATCCGGCTGCAACTCCAGATGAGCTTCTTCATGCTGCTACCGAACCAAACGCTTTGTAG 2124 0.4421 MEANKEEALKAIEIAEKRFAVRDFAGAKNYAVKARTLCPGLEGISQMVATFEVYVASEVKHNGDLDYYSILGLKPFADKEAVKKQYKKLAVLLHPDKNKCVGADEAFKLVSEAWTWLSDSAMRSSYDLKRNAQLGGTNQMNLSPAHATGAAGYNKCSNLSTPRGRLDTFWTICTSCNVQYEYLRKYVNKRLSCKNCRGTFVAVETGAAPANGSFPYCPWSYVPGNGYGSHSFDGVSYVPTSAPYFNGNGVAGYHSGHGYEYVPNVSFQWGSAGVVNQNGSTTLPADSVNRANGNVKRGRPKIKTGADKRYHVAETVVNTNSDVPFSCSDPQEDKLSRPDKKQKVVVGATFRNGYEEKGSKYALESIVSNGNDSTGHGQKPFCTVEVQTKQCSMAPAFDARKLLIEKARTEIRKKLEEMKLSSEAAVAAAAALKEREKSQAEVGQVKRETCRKTALNVSGLQLENGKTGPISITVPDSDFHDFDKDRSEECFRPKQIWALYDEEDGMPRLYCMIREVVAVNPFKILISYLSSKTDTEFGSVNWLDSGFTKSCGNFRAFNSDVVDQVNIFSHVLSQEKAGRGGCVRIYPRSGDIWAVYRNWSPDWNRSTPDEVRHQYEMVEVLDDYSEELGVCVSPLVKLAGYKTVYQSNTDKSAIKWIPKREMLRFSHQVPSWLLKGEAENLPERCWDLDPAATPDELLHAATEPNAL* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01160 707 Pfam Domain of unknown function (DUF3444) 471 677 IPR024593 -
Lapu8g01160 707 SMART dnaj_3 65 122 IPR001623 -
Lapu8g01160 707 Gene3D DnaJ domain 54 148 IPR036869 -
Lapu8g01160 707 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Lapu8g01160 707 Pfam DnaJ domain 66 127 IPR001623 -
Lapu8g01160 707 PRINTS DnaJ domain signature 86 101 IPR001623 -
Lapu8g01160 707 PRINTS DnaJ domain signature 68 86 IPR001623 -
Lapu8g01160 707 PRINTS DnaJ domain signature 102 122 IPR001623 -
Lapu8g01160 707 CDD DnaJ 66 119 IPR001623 -
Lapu8g01160 707 MobiDBLite consensus disorder prediction 281 301 - -
Lapu8g01160 707 SUPERFAMILY Chaperone J-domain 59 131 IPR036869 -
Lapu8g01160 707 Coils Coil 404 424 - -
Lapu8g01160 707 Coils Coil 428 448 - -
Lapu8g01160 707 PANTHER BNAC03G44070D PROTEIN 1 694 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01160 Lapu-Chr8 29422297 29425981 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01160 4 301 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.556 1.41e-33 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01160 - - vun:114194067 1357.43