Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01159 ATGCGGATTGTGGTGATTGATAAAACCATATTAGCAATGGAATGGGACGAATTGATGGACACCCTTTATGGATTTTTGGCTGATATTTCAAAAGATTTGGTGTGTGGAGCTGTCAATCAATTACGTTACTCCTTTTGCTTCAATGATTTTGTTAAAGAGCTTGAAAAAGAAGAAGACAAGGTCACCGCAACAATAAGGAGTGTAGAAGATCGTGTCACACATGCCCGGAGACAAACCTTAAAGACTGCTGAAGTCATTGAGAAATGGTTGGAGAATGCTAACATTGATGCAGAAGATGTGAATCGTTTGCTGAAAGAGGCAAATGCCAAAAAGAGTTGTTGTTTTGGGTACTGTCCAAATTGGATTTGGCGATACCGTTTAGGAAAGAAGTTGGCAAATAAAAAAACAGACCTTCAAAACATCATTCAAGAAGGTACACGATATATACAACTTGAACGCATTGCTTCAATTCCTTCAAACACTATTGATATTCTCACAGAAAAAGTTACGAATTTTGAGAGTAGAAAATATATTTATGATAAACTAATGGAAGCACTGAAAGATGACGGGGCTGCCATGATTGGATTGTGGGGGATGGGGGGATGTGGTAAAACCACATTAGCAATGGAAGTTAAGAAGATGGCAGAAGCTGAGCATCTTTGTGACAGAGTTATTTTTGTGCCTGTGTCTAGTACAGTAGAAGTTCCTAGGATTCAAGAAAAAATTGCAAGTTCATTGCAGTATAAATTTCAAGAAAGTGAAGAAATGGAGAGAGCCCAACGATTGTGCATCACATTAACCCAAGAAAAAAAGATTCTTATGATTCTCGATGATGTGTGGGAGAAGCTTGATTTTGGTCGCATTGGGATTCCCTCCTCTGAACACCACGAAGGCTGCAAGATTCTCATTACCACTAGATCGGAAGAAGTTTGTACTTTAATGGATTGCCAAAGAAAGATTTATCTGCCAATCTTAACTGATGAAGAAGCATGGAGTCTTTTCCAAAACAAAGCGCTTATGTCTGAAGACACCCCTGAAACCATCAAGCATTTGGCAATCTCAATTTCAAAGGAATGTAAAGGATTGCCTGTTGCCATTGCAGCTGTTGCTGGCAGCTTGAAGCACAAAGAAGAGGTGATGTGGAGTGCTGCGTTGAATAAATTGAGAAGTTCTAAACCAGTCAATATTGGAAAAGGCTTGCGAGATCCCTATAAGTGTTTACAGTTGAGCTACGATAATCTAGATACTGAAGAAGCTAAATCACTTTTCCTGTTGTGTTCTGTATTCCCTGAAGATTACGAGATTCCAATTGAATGTTTAATAAGATGTGCAATAGGGTTAGGTGTGGCTGGAGAAGTTGATTCATACGAAGAGGCAAGGAGTGAAGTGATAGCAGCCAAAATTAAGCTTGTAAGTTCTTGTTTGATGTTGGATGCAGATGATGAATGTGTCAAAATGCATGACTTGGTTCGCGATGTAGCCCAGTGGATAGCAAAGAATGAGAATAAGATCATCAAGTGTGAACCGGAAAAGTGA 1536 0.3919 MRIVVIDKTILAMEWDELMDTLYGFLADISKDLVCGAVNQLRYSFCFNDFVKELEKEEDKVTATIRSVEDRVTHARRQTLKTAEVIEKWLENANIDAEDVNRLLKEANAKKSCCFGYCPNWIWRYRLGKKLANKKTDLQNIIQEGTRYIQLERIASIPSNTIDILTEKVTNFESRKYIYDKLMEALKDDGAAMIGLWGMGGCGKTTLAMEVKKMAEAEHLCDRVIFVPVSSTVEVPRIQEKIASSLQYKFQESEEMERAQRLCITLTQEKKILMILDDVWEKLDFGRIGIPSSEHHEGCKILITTRSEEVCTLMDCQRKIYLPILTDEEAWSLFQNKALMSEDTPETIKHLAISISKECKGLPVAIAAVAGSLKHKEEVMWSAALNKLRSSKPVNIGKGLRDPYKCLQLSYDNLDTEEAKSLFLLCSVFPEDYEIPIECLIRCAIGLGVAGEVDSYEEARSEVIAAKIKLVSSCLMLDADDECVKMHDLVRDVAQWIAKNENKIIKCEPEK* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01159 511 FunFam Probable disease resistance protein At1g61300 163 319 - -
Lapu8g01159 511 Pfam NB-ARC domain 178 413 IPR002182 GO:0043531
Lapu8g01159 511 Gene3D - 156 321 IPR027417 -
Lapu8g01159 511 Gene3D - 410 496 IPR036388 -
Lapu8g01159 511 Coils Coil 51 71 - -
Lapu8g01159 511 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 42 503 - -
Lapu8g01159 511 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 169 426 IPR027417 -
Lapu8g01159 511 Coils Coil 90 110 - -
Lapu8g01159 511 PRINTS Disease resistance protein signature 193 208 - -
Lapu8g01159 511 PRINTS Disease resistance protein signature 266 280 - -
Lapu8g01159 511 PRINTS Disease resistance protein signature 359 373 - -
Lapu8g01159 511 Gene3D - 325 409 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01159 Lapu-Chr8 29416769 29421180 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01159 194 506 WRKY Transcription Factor Family AT5G45050 24.390 3.20e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01159 - - var:108331722 823.542