Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01154 ATGTCCCAGGAAAGCACGGCCTCAGCTGGTGGTGATGGTGGTGCCAGCATTGAACTTGGCGCTACCTTACTTGGTTCTACTACCCTCTCCAAAGGGAAGTACACCAGGATTTGGCGTAAAAGTTTGTACATAAGGTTCCTCCTTTCTGTGAAGAAGCCAGCAACTTCCAGTGTCAACCATGAGTCTCCACCATCACCAGACTCACAACTTCCTTCAATACCATACACTTCATGGTCTCCTGCTAGAACCTCCTCTTCCATATCCTATCACGCAATTGATATAGATGGGGTTGACTCAGTTTCCACTGTCCTTGGAGGTCAACGTCAATACACACAGGATTGCGATTCCATTGATGAGGGGAACACCACCATACCATTACTAGTTCTTGGAACAGACTTGTCAAAGTCTTTATTGAACAGCTACAAATGCTACCGTTGCACAATTTTGATGCTGTTGGCCTCAGCTGGGTTGTCCTTCGCCATAGACTTCAAGCAGGAGGGACCTAAACATGGTTGGCATGATGGTTTTGCTATACTATTTGCTCTTCTCCTGCTGGTTCTAGGAAAATCGGTAGCAAACTTTTTGTGTGAGAGGAAAAAGTTGAAATTGGCGGAGAGAAAGCACGAGTTGGAATTCAGAGTGAAACGAGGCGAAGAGTCCCTAGAGGTTCCCACATCTGAGATTGTGGTGGGTGACACAGTCTTCCTGTGGCTAGGCGATGAAGTTCCAGCAGATGGTGAGCTTGTAAGTGATGGCATCCTTGTGCTGGCTGAGCTCGAGGAAATAAAAATCAAACAGAAGGGGAAGAATCCGTCTCTTATATCTGGTTCGAAGGTAATTGGGGGTCAGGGAAGGATGTTGGTAACGTCAGTTGGAACCAAAACCAATTTGGCTAAGATATGTACCTGTAATTCTGAAAGGAAGGGTTTGTTGGAAAGACAAATTGAGAAGCCAATTTCTTATATTGACATGGCTGCTCTTTGTATCTCTGTACTGGTTGCACTTGTGGTGTTCATTCGCCTAATTTATGGAAAAGATGGGAGCAATGCAGGGTTGCCAGAAATGAAAGGGAAGGTCTCAATTGGCTTGTTGATAAAAGTCCTTCAGAGAACTTTTCTGAGACCCCAAGGAAGGGTTTCCATTTTAACAGGTCTTGTTACTGTTGCAATACTTTGCGTGCAGCATGGAATGCCACTTGTGGTTACAATTTCTCTTAAGTACCAGATTGATAAGGAAGTCCGAAACCAAGATGCTGTTCTTAATGATTTGTCCGCTTGTACGACAATGGGGTTGGTAACTGTTATCTGTATCGATGTATCAGGGGAGCTCATATCTAAACCAATGGAAGTTAGCAGAATATGGATGGGAGAGACAGATGTCAGCATGGTTGAGGGATCAGAAACAGAAAAACCAGTGCTTGACATGCTTAAACTAGGGGTTGGTTTATCAATCCTTGCACCAGAGATTTATCTTTCCCCTTTGTTCAACTCACTTGTTTCATGGGCAGAAACAAAATGGGAAATGAACATGAGATCTTTTACAGAAGAAAAATTTGACATTCTTAAGCACAGCAAATTGAATTCTGGCAAACAAGGCAGTGGAGTTTTGGTGAGAAAAATTGGGGACAGTGAAGTTCTTCACTTGCACTGGAGTGGAGCTGCATCCGCAATATTGGAGATGTGTTCACAATACCATGATAGCAAGGGGAATTGCCATGCCATGGAAAATCAGAAAATCAAATTTGGGCAGGTGATTAAAGAGATGGAGGATCGTGGCCTTAGGTCAATTGCTTTTGCTTATAAACAAACAGATGGAGAAGAACTTGAGCAAGAAGAACTGATCTTGTCTGGACTGATAGGCCTGAAAGACACTAGTCAAGAATCCATAAGATCAGCTTTGGAAAAATTCAGAAATGCTGCAAATGTACAGATAAAACTGGTCTCGGAGGAGGGCATCGAGAAATTGGAAGGCATTGCTTGTGAACTAGGGCTAGAACATGGTGTTGTGCTAGAAGGCAAACAACTACAAGATTTGAATGAGGAAGCTAGATTAATCGAAGTGGATCGAGCTCATGTAATGGCAAGATTCCTTCCCGAGGACAAACTTCTCATGATAAAGTGCTTGCAAGAGAAAGGCAAGGTGGTTGCATTCATTGGGACAAGGTTGATGACTAGTCATACTTCAGTTCTAAAGATAGCTGACGTGGGTATAGTGCGTGATTCTCTAAGCACAAGAGTGGATGGAGATAGTTGTGACATATCTATCAAATGTTTCAGTGCATTGGAACCCATTGTGATAGCTGGCAGAAGTAAATACCACAATATTCAGAAGTTCATTCAACTTCAGTTGACATGTACCATATCAGGATCAGTCATAACCTTGATTACAACCTGTACTGGAGATTCCCCCCTTGCACCGTTCCAGTTGATTTGGGTGAATGTTTTGATATGCATTCTGGGTGGCCTAATGATGGCAATGAAGTTAACCAACGAGGAACAGCTTGCTAAACAACCATCTGATCATAGAAACCAACATATTATAGCCAAAGAAATCTGGAAAAGCATTATCATTCAGGTACTATACCAGACTTCTGTATCGATGATACTTGAGTTTGGGGGGCATGTTACTGACTGGGAGAAAAAATTTAGGGAAACCATGGTCTTTAACACCTTCTTATTGTGCCAAATCGTCAATCTGCTCAACACCATGCAGTTGTTGAGAAAGGAAGTTCTTGTTCAGAGCTTCTATTTCTTGGGGGCCTTAGTTTGCTGTTTTCTAATGCAAGTGGTGGTGATTGAGTATGCTAAAGGCCTAGCAGATTGCATGCAGCTGAATGCTACGAGATGGGGTATCTGTGTCATGATTGGTGCTTTTGCATGGGTATTTGAGTGGAGCATGAAGAATATTCCAGATTTTCTCAATCCCAGCACCAGTTATTCATCAGAATCAATTACTTCACCTTCTTTCTATCTTTCTCCAGCTTTTCCATTTCTGATGCTACTTTTGTTCCCTATAGGACTAACTTTAGTCAGATAG 3036 0.4259 MSQESTASAGGDGGASIELGATLLGSTTLSKGKYTRIWRKSLYIRFLLSVKKPATSSVNHESPPSPDSQLPSIPYTSWSPARTSSSISYHAIDIDGVDSVSTVLGGQRQYTQDCDSIDEGNTTIPLLVLGTDLSKSLLNSYKCYRCTILMLLASAGLSFAIDFKQEGPKHGWHDGFAILFALLLLVLGKSVANFLCERKKLKLAERKHELEFRVKRGEESLEVPTSEIVVGDTVFLWLGDEVPADGELVSDGILVLAELEEIKIKQKGKNPSLISGSKVIGGQGRMLVTSVGTKTNLAKICTCNSERKGLLERQIEKPISYIDMAALCISVLVALVVFIRLIYGKDGSNAGLPEMKGKVSIGLLIKVLQRTFLRPQGRVSILTGLVTVAILCVQHGMPLVVTISLKYQIDKEVRNQDAVLNDLSACTTMGLVTVICIDVSGELISKPMEVSRIWMGETDVSMVEGSETEKPVLDMLKLGVGLSILAPEIYLSPLFNSLVSWAETKWEMNMRSFTEEKFDILKHSKLNSGKQGSGVLVRKIGDSEVLHLHWSGAASAILEMCSQYHDSKGNCHAMENQKIKFGQVIKEMEDRGLRSIAFAYKQTDGEELEQEELILSGLIGLKDTSQESIRSALEKFRNAANVQIKLVSEEGIEKLEGIACELGLEHGVVLEGKQLQDLNEEARLIEVDRAHVMARFLPEDKLLMIKCLQEKGKVVAFIGTRLMTSHTSVLKIADVGIVRDSLSTRVDGDSCDISIKCFSALEPIVIAGRSKYHNIQKFIQLQLTCTISGSVITLITTCTGDSPLAPFQLIWVNVLICILGGLMMAMKLTNEEQLAKQPSDHRNQHIIAKEIWKSIIIQVLYQTSVSMILEFGGHVTDWEKKFRETMVFNTFLLCQIVNLLNTMQLLRKEVLVQSFYFLGALVCCFLMQVVVIEYAKGLADCMQLNATRWGICVMIGAFAWVFEWSMKNIPDFLNPSTSYSSESITSPSFYLSPAFPFLMLLLFPIGLTLVR* 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01154 1011 Gene3D - 493 617 IPR023299 GO:0000166
Lapu8g01154 1011 Gene3D - 433 445 IPR023214 -
Lapu8g01154 1011 Pfam Cation transporting ATPase, C-terminus 802 966 IPR006068 -
Lapu8g01154 1011 Gene3D - 148 432 - -
Lapu8g01154 1011 Gene3D - 446 463 IPR023299 GO:0000166
Lapu8g01154 1011 FunFam - 758 976 - -
Lapu8g01154 1011 PANTHER CATION TRANSPORTING ATPASE 143 971 - -
Lapu8g01154 1011 Gene3D - 759 974 - -
Lapu8g01154 1011 SUPERFAMILY Calcium ATPase, transduction domain A 211 301 IPR008250 -
Lapu8g01154 1011 MobiDBLite consensus disorder prediction 55 74 - -
Lapu8g01154 1011 Gene3D - 618 758 IPR023214 -
Lapu8g01154 1011 SUPERFAMILY HAD-like 434 820 IPR036412 -
Lapu8g01154 1011 SUPERFAMILY Calcium ATPase, transmembrane domain M 147 972 IPR023298 -
Lapu8g01154 1011 Gene3D - 197 304 - -
Lapu8g01154 1011 Pfam E1-E2 ATPase 212 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01154 Lapu-Chr8 29383440 29387232 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01154 141 979 Primary Pumps ATPases AT3G63380 33.523 1.31e-130 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01154 K01537 - gmx:102661547 1318.52