Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01153 ATGGCCACCACTGCTTTCCAGCAATCAGCATTCGCTGGTCAAACTGCTCTGAAGCAGGTCAATGAGTTCGTCCGCAAGACCGGTGGCTCCGGCAAAGGTCGCACTAACATGCGCCGTACCGTCAAGAGTGCTCCTCAGAGCATTTGGTATGGCCCTGACCGTCCCAAGTACTTGGGTCCATTCTCTGACCAGATTCCTTCATACCTGACTGGTGAATTCCCTGGTGACTACGGATGGGACACAGCTGGATTATCAGCTGACCCTGAAACCTTTGCCAGGAACCGTGAGTTGGAGGTGATTCACAGCAGATGGGCCATGCTTGGTGCTCTAGGATGCACCTTCCCAGAGATCCTCGAGAAGAATGGTGTGAAATTCGGTGAGGCAGTGTGGTTCAAGGCTGGTGCCCAGATCTTCTCTGAGGGAGGGCTTGACTACTTGGGGAACCCAAATCTGATCCATGCTCAGAGCATTCTTGCCATCTGGGCTGTTCAGGTTGTGCTGATGGGGTTTGTTGAAGGGTACAGAGTTGGTGGAGGACCTCTTGGTGAAGGCCTAGACCCTATCTACCCTGGAGGTGCCTTTGACCCTCTTGGTCTTGCTGATGACCCTGATGCATTTGCTGAGTTGAAGGTCAAGGAACTCAAGAATGGTCGGTTGGCTATGTTCTCCATGTTTGGTTTCTTTGTTCAGGCTATTGTTACTGGCAAGGGCCCTATTCAGAACCTTTACGACCATGTTGCTGATCCTGTTGCCAACAATGCTTGGGCTTATGCCACCAACTTTGTCCCTGGACAATGA 798 0.5188 MATTAFQQSAFAGQTALKQVNEFVRKTGGSGKGRTNMRRTVKSAPQSIWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPEILEKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANNAWAYATNFVPGQ* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01153 265 Gene3D Chlorophyll a/b binding protein domain 56 258 - -
Lapu8g01153 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 4 264 IPR001344 GO:0009765|GO:0016020
Lapu8g01153 265 Pfam Chlorophyll A-B binding protein 66 231 IPR022796 -
Lapu8g01153 265 SUPERFAMILY Chlorophyll a-b binding protein 48 262 - -
Lapu8g01153 265 FunFam Chlorophyll a-b binding protein, chloroplastic 56 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01153 Lapu-Chr8 29379352 29381457 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01153 1 265 Chloroplast and Mitochondria Gene Families AT2G05070 86.415 5.43e-177 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01153 K08913 - gmx:100815789 540.036