Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01146 ATGCAGGCATCAGAGCAACATAGAAGTTCAAGCATGTACTATCAACCATTACAACAAATTGAAGCCTACTGCTTGCCACAGTATCGGACTCTAAATCAACAGCTATACTACCATGATGGAGGCCATGGAACTCACTTTTCAACTCCAAGTTCTTCTGAACTTTACTGTACATTGGAGTCATCTTCTGTAGCTGGTAGTTTCACCCTTTACAACTCCCCTTCAACTGTTAGTTTCTCACCTAATGATAGCTCCATATCGCAGCAAGACTCTCAGTCATATCCACCCGACCAGTATCATTCCCCTGAGAATACCTATGGCTCTCCATTGAGTGGCTCCTGCATTTCCGATGATTTAAGCAGCTTCAAGCACAAGCTGAGAGAGTTGGAAAGTGTAATGCTTGGCCCTGACTCTGATAATCTTGATAGTTATGACAGTGCCATAAGCAATGGAAACAACTTTGCTTCACTTGAGATGGACAGTTGGAGACAAACAATGGTGGCAATTTCTAGCAAAAACCTGAAGCACATCCTTATTGCGTGTGCCAAAGCCATTGCAGACAATGATTTGCTCATGGCACAGTGGCTGATGGATGAACTGAGGCAGATGGTGTCAGTTTCTGGCGATCCAATTCAACGGTTGGGAGCATACATGCTGGAAGGACTTGTTGCCCGATTGGCTGCTTCTGGGAGTTCACTATACAAAGCTTTGAGATGCAAAGAACCAGAAAGTGCTGAGCTTCTTTCCTACATGCACATACTGTATGAGGTTTGCCCCTACTTCAAATTTGGGTACATGTCTGCAAATGGAGCCATTGCAGAAGCTATGAAAGATGAAGACAGGGTGCATATAATTGATTTCCAAATTGGTCAAGGAAGCCAGTGGATCACTTTAATTCAGGCTTTTGCAGCTAGACCTGGAGGGCCACCCCACATCCGGATTACGGGTATTGATGACTCACAATCAGCTTATGCCCGCGGTGGGGGACTGCACATTGTGGGAAGGAGGTTATCAAAGCTTGCTGAGCATTTTAAGGTTCCGTTTGAATTTCATGCTGCAGCTATCTCTGGGTGTGATGTTCAACTGCATAACCTTGGAGTTCGACCGGGGGAAGCTCTGGCTGTGAACTTTGCGTTCATGCTACATCACATGCCGGATGAAAGTGTGAGTACTCAGAATCACAGGGACAGGCTGTTGAGGTTGGTTCGGAGCCTATCGCCAAAGGTGGTGACACTTGTTGAGCAGGAATCTAACACAAACACTGCAGCATTCTTTCCACGTTTCCTTGAAACTATGGACTATTATACAGCAATGTTTGAGTCAATAGATGTGACTCTTCCCAGAGATCATAAAGAGAGAATCAATGTTGAGCAACATTGTTTGGCAAGAGACTTGGTTAACATCATAGCTTGTGAAGGGGTTGAGAGGGTGGAACGGCATGAGGTGCTTGGGAAGTGGAGGTCAAGATTTGCAATGGCCGGTTTCACTCCTTACCCTTTGAGTTCACTAGTGAATGGAACCATTAAGAAATTGCTTGAGAACTACAGTAATAGATATAGACTTGAAGAGAGAGATGGAGCTCTTTATCTGGGCTGGATGAATAGAGATTTGGTTGCTTCTTGCGCATGGAAATGA 1632 0.4485 MQASEQHRSSSMYYQPLQQIEAYCLPQYRTLNQQLYYHDGGHGTHFSTPSSSELYCTLESSSVAGSFTLYNSPSTVSFSPNDSSISQQDSQSYPPDQYHSPENTYGSPLSGSCISDDLSSFKHKLRELESVMLGPDSDNLDSYDSAISNGNNFASLEMDSWRQTMVAISSKNLKHILIACAKAIADNDLLMAQWLMDELRQMVSVSGDPIQRLGAYMLEGLVARLAASGSSLYKALRCKEPESAELLSYMHILYEVCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSQSAYARGGGLHIVGRRLSKLAEHFKVPFEFHAAAISGCDVQLHNLGVRPGEALAVNFAFMLHHMPDESVSTQNHRDRLLRLVRSLSPKVVTLVEQESNTNTAAFFPRFLETMDYYTAMFESIDVTLPRDHKERINVEQHCLARDLVNIIACEGVERVERHEVLGKWRSRFAMAGFTPYPLSSLVNGTIKKLLENYSNRYRLEERDGALYLGWMNRDLVASCAWK* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01146 543 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 145 537 IPR005202 -
Lapu8g01146 543 ProSiteProfiles GRAS family profile. 164 543 IPR005202 -
Lapu8g01146 543 Pfam GRAS domain family 173 543 IPR005202 -
Lapu8g01146 543 MobiDBLite consensus disorder prediction 78 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01146 Lapu-Chr8 29322912 29326475 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01146 12 543 GRAS Transcription Factor Family AT5G48150 66.543 0.0 711
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lapu8g01146 GRAS 1e-138 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01146 - - gmx:100808300 1030.78