Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01100 ATGGGTTGCTGCCAATCATCGATGCTGCTGAGAGTGGGGGAGAGGGAGACTCACCCGGAAAAGGAAAAGGAAAGGGAAAGGGAAAAGGAAAAGGAAAGGGAAAGGGAAAAGGAGAAGGAGAAAGAGCAAGCGTACGGAACCCAGCAGAGGGGTTGTCTGGGAGGAGATGGAGAGGGAGAAGGGGGCAAAGATGGGCTCGATTTCTCCTTCGCCGAGTTCTCTCTGCCGGAGCTGAAGGCCGCCACCAACAATTTCAGCTCAGACTATATCGTCTCAGAGAGTGGGGAGAAGGCGCCTAACCTCGTCTACAAGGGTCGCCTCCAGAACCAGAGCCGTTGGATTGCGGTGAAGAAGTTCAGCAAGGCTGCCTGGCCGGATCCCAAGCAGTTCGTCGAAGAGGCTTCCGGCGTTGGCAAGCTGCGCCACCCAAGGCTCGCTAATTTAATCGGTTACTGCTGCGACGGCGATGAGAGGCTCCTCGTTGCCGAGTACATGCCCAATGACACTCTCGCCAAGCATCTCTTCCACTGGGAAACTCAGACTATTGAGTGGGCCATGCGCTTGCGGGTGGCTCTTTACATCGCACAGGCTTTGCATTATTGCAGTTCAGAGGGGCGCCCCCTTTACCACGACTTGAATGCTTACCGTGTTCTCTTCGACCAGGAAGGTGATCCTCGTCTCTCTTGTTTCGGTTTTATGAAGAACAGCAGGGATGGCAAGAGCTACAGCACCAATCTTGCTTATACTCCTCCTGAATATTTAAGAAACGGAAGGGTCACTCCTGAAAGTGTCATTTACAGCTTTGGAACCGTCCTTCTAGACCTCCTCAGTGGCAAACACATCCCTCCCAGTCATGCACTTGATATGATACAGGGGAAGAACAATATGCTCTTAATGGATTCACATTTGGAGGGAAAGTTTTCTACAGAAGAAGCGACAGTAGTGGTTAATCTTGCCTCTAAATGCTTGCAATATGAACCGAGGGAACGGCCTGACACGAAGGATTTGGTAACCACACTTGCCCCATTGCATACAAAACCCGATGTTCGTTCTCACATCATGCTTGGAATTCCAAAGCACGAGGAAGCACCATCAACCCCACAACGTCCTCTTTCTGCAATGGGAGAGGCTTGTTCAAGAATGGACCTAACTGCAATACATCAGATCTTGGTTGCGACACACTACAGAGATGACGAAGGAACTAATGAGCTGTCTTTCCAAGAGTGGACTCAACAGATGAGAGATATGCTGGAGGCAAGGAAGCGTGGAGACTATGCATTCCGTGACAAAGACTTCAAGACAGCCATTGATAACTATTCCCAGTTTATTGATGTGGGAACGATGATCTCCCCGACTGTTTTTGCAAGACGCAGTCTATGCTATCTGTTATGTGATCAACCAGATCCTGCTCTACGAGACGCAATGCAAGCACAGTGTGTTTATCCAGACTGGGCGACGGCTTTCTACATGCAATCAGTTGCACTTGCGAAGCTGGACATGCACAAGGATGCGGCTGATATGTTAAATGAGGCAGCTGCATTAGAAGAGAAGAGACAAAGAGGAGCGAGAGGATCATAA 1578 0.4994 MGCCQSSMLLRVGERETHPEKEKEREREKEKEREREKEKEKEQAYGTQQRGCLGGDGEGEGGKDGLDFSFAEFSLPELKAATNNFSSDYIVSESGEKAPNLVYKGRLQNQSRWIAVKKFSKAAWPDPKQFVEEASGVGKLRHPRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWETQTIEWAMRLRVALYIAQALHYCSSEGRPLYHDLNAYRVLFDQEGDPRLSCFGFMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIYSFGTVLLDLLSGKHIPPSHALDMIQGKNNMLLMDSHLEGKFSTEEATVVVNLASKCLQYEPRERPDTKDLVTTLAPLHTKPDVRSHIMLGIPKHEEAPSTPQRPLSAMGEACSRMDLTAIHQILVATHYRDDEGTNELSFQEWTQQMRDMLEARKRGDYAFRDKDFKTAIDNYSQFIDVGTMISPTVFARRSLCYLLCDQPDPALRDAMQAQCVYPDWATAFYMQSVALAKLDMHKDAADMLNEAAALEEKRQRGARGS* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01100 525 ProSiteProfiles Protein kinase domain profile. 88 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01100 525 FunFam probable serine/threonine-protein kinase At4g35230 414 523 - -
Lapu8g01100 525 SUPERFAMILY Protein kinase-like (PK-like) 70 344 IPR011009 -
Lapu8g01100 525 Gene3D Transferase(Phosphotransferase) domain 1 166 357 - -
Lapu8g01100 525 MobiDBLite consensus disorder prediction 1 58 - -
Lapu8g01100 525 Pfam Protein kinase domain 101 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01100 525 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 21 520 IPR045845 GO:0004672|GO:0009742
Lapu8g01100 525 SUPERFAMILY TPR-like 417 518 IPR011990 GO:0005515
Lapu8g01100 525 FunFam probable serine/threonine-protein kinase At4g35230 62 164 - -
Lapu8g01100 525 MobiDBLite consensus disorder prediction 13 45 - -
Lapu8g01100 525 Coils Coil 20 43 - -
Lapu8g01100 525 Gene3D Phosphorylase Kinase; domain 1 63 164 - -
Lapu8g01100 525 Gene3D Tetratricopeptide repeat domain 414 523 IPR011990 GO:0005515
Lapu8g01100 525 FunFam probable serine/threonine-protein kinase At5g41260 166 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01100 Lapu-Chr8 29041908 29051081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01100 73 364 Glycoside Hydrolase AT3G07070 34.395 6.18e-47 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Lapu8g01100 Pkinase 1.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01100 K14500 - gmx:100808907 967.222