Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01087 ATGATGGATAACGAGGTGTTAGAGTTTGATATTGGGCTGGGAGGAGGCGAGGGAGAATATGACGATGATGGAGGAATTGAAGAGGAGGAATTGGGTGATAGCAGTGGGGGTGGTGCTGTTGCCGCTGGAATATATCTTCCCGAGGGGGACCTCTCAGATCTCGAACCTTGCGAGGGCATGGAATTCGAGTCTGAAGAGGCTGCTAAGGCCTTCTACAATTCCTATGCCCGTCGTGTTGGGTTTAGTACTCGTGTCAGCTCATCCCGTCGTTCCAGGCGCGATGGAGCTATCATACAGAGACAATTTGTTTGCGCAAAGGAGGGTTTCCGCAACTTGAATGAAAAGCGCACGAAGGATAGAGAGATCAAGCGCCCCCGGACAATTACCAGAGTCGGATGTAAAGCTTCTTTGTCCGTCAAAATGCAAGACTCTGGCAAGTGGGTCGTGTCTGGCTTTGTTAGAGAACATAATCACGAACTCGTTCCCCCGGACCAGGTGCATTGCCTTCGCTCTCACAGGCAAATATCTGGAGCTGCCAAGACGCTCATTGATACTTTGCAGGCTGCTGGGATGGGTCCTCGTAGAATTATGTCAGCACTCATTAAAGAGTATGGTGGGATTAGCAAAGTCGGCTTCACAGAGGTCGACTGTAGGAATTACATGAGGAATAATAGGCAGAGAAGTTTAGAAGGGGACATTCAACTTGTTCTCGATTATTTGAGACAAATGCACGCCGAAAACCCTAATTTCTTCTATGCTGTTCAAGGTGATGAGGATCAGTCCATAACCAATGTTTTCTGGGCTGATCCCAAGGCAAGGATGAATTATACATTTTTTGGTGATACTGTAACTTTTGACACTACATACCGATCTAATAGGTATCGCTTACCATTTGCTCCCTTTACTGGTGTAAACCATCATGGGCAGCCTGTTCTTTTTGGTTGTGCCTTCCTAATTAATGAATCTGAAGCATCATTTGTATGGCTTTTCAAGACATGGCTTATGGCCATGTCTGGACGTCCACCAGTGTCAATAACAACTGATCATGATTCTGTAATTCGATCAGCCATAATACAAGTCTTCCCGGAGACCCGCCACCGCTTCTGTAAGTGGCACATCTTTAAAAAATGCCAGGAGAAGTTATCTCATATTTTCCTCAAATTTCCAAATTTTGAAGCTGAATTTCACAAATGTGTTAACTTAACTGAGTCAATTGAGGAATTTGAGTCTTGCTGGTCAACACTCCTAGATAAATATGATCTCAGGGACCATGAATGGCTTCAAGCAATATATTCTGCTTGCAGGCAGTGGGTACCTGTTTATTTGCGAGACACATTCTTTGCAGAAATGTCTATCACTCAGCGAAGTGATAGCATGAACTCTTACTTTGATGGGTATATAAATGCTTCAACCAATTTAAATCAGTTCTTTAAGCTGTATGAGAAAGCACTTGAAAGTCGCAATGAGAAGGAAGTGAGAGCTGATTATGACACAATGAATACTTTGCCAGTATTGAGGACCCCATCTCCAATGGAGAAGCAAGCATCTGAGCTTTACACCAGAAAGATTTTCATGAGGTTCCAGGAGGAGTTAGTTGGTACACTAACATTCATGGCATCCAAAGCTGATGATGATGGGGAGGTCATTACATATAATGTAGCTAAATTTGGAGAGGAACATAAAGGATACTATGTTAAATTCAATGTTTTGGAGATGAAAGCAACTTGTAGTTGCCAAATGTTTGAGTTTTCAGGCCTTCTTTGCAGACATGTTTTGGCAGTCTTTAGAGTAACCAATGTGCTTACTCTCCCATCTCATTATATATTGAAACGTTGGACAAGAAATGCAAAGAGCAATGTAATATTAGAAGAACATTCTTGTGATGTATATGCTTACTATTTGGAATCTCATACAGTTAGATATAACACCCTTCGGCATGAGGCCTTTAAATTTGTTGATGAAGGCGCACATTCTGCTGAAACTTATGACGTTGCGATGGATGCTTTACATGAAGCTGCAAAAAGAGTTTCTCAGGCAATGCAAAGTGAGGGAAGAATTCCTATCAGCAATGGAAAATTAAGGAGTCATGTGCCGAATGATGAAAGTCATTCTAATTACACAAGTGCATGCCAGGAAGAATGCTTGAGCCAACATACGTCTAAGGATGATATGGATACAAATATTAGAAAACTTCTGAATGAGCTTGAGTGTGCAAATCGGAAGTGCGAAATTTATAGGTCCAACCTGCTTTCAGTTTTGAAAGCTGTTGAGGATCACAAGTTAGAGTTATCTGTTAAGGTGGAAAATATCAAAATAAGCATGAAAGATGGCATCTAA 2337 0.4198 MMDNEVLEFDIGLGGGEGEYDDDGGIEEEELGDSSGGGAVAAGIYLPEGDLSDLEPCEGMEFESEEAAKAFYNSYARRVGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNLNEKRTKDREIKRPRTITRVGCKASLSVKMQDSGKWVVSGFVREHNHELVPPDQVHCLRSHRQISGAAKTLIDTLQAAGMGPRRIMSALIKEYGGISKVGFTEVDCRNYMRNNRQRSLEGDIQLVLDYLRQMHAENPNFFYAVQGDEDQSITNVFWADPKARMNYTFFGDTVTFDTTYRSNRYRLPFAPFTGVNHHGQPVLFGCAFLINESEASFVWLFKTWLMAMSGRPPVSITTDHDSVIRSAIIQVFPETRHRFCKWHIFKKCQEKLSHIFLKFPNFEAEFHKCVNLTESIEEFESCWSTLLDKYDLRDHEWLQAIYSACRQWVPVYLRDTFFAEMSITQRSDSMNSYFDGYINASTNLNQFFKLYEKALESRNEKEVRADYDTMNTLPVLRTPSPMEKQASELYTRKIFMRFQEELVGTLTFMASKADDDGEVITYNVAKFGEEHKGYYVKFNVLEMKATCSCQMFEFSGLLCRHVLAVFRVTNVLTLPSHYILKRWTRNAKSNVILEEHSCDVYAYYLESHTVRYNTLRHEAFKFVDEGAHSAETYDVAMDALHEAAKRVSQAMQSEGRIPISNGKLRSHVPNDESHSNYTSACQEECLSQHTSKDDMDTNIRKLLNELECANRKCEIYRSNLLSVLKAVEDHKLELSVKVENIKISMKDGI* 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01087 778 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 51 678 IPR031052 GO:0006355
Lapu8g01087 778 MobiDBLite consensus disorder prediction 15 30 - -
Lapu8g01087 778 Pfam FAR1 DNA-binding domain 71 162 IPR004330 -
Lapu8g01087 778 Coils Coil 721 748 - -
Lapu8g01087 778 Pfam SWIM zinc finger 557 597 IPR007527 GO:0008270
Lapu8g01087 778 Pfam MULE transposase domain 283 376 IPR018289 -
Lapu8g01087 778 ProSiteProfiles Zinc finger SWIM-type profile. 563 599 IPR007527 GO:0008270
Lapu8g01087 778 MobiDBLite consensus disorder prediction 10 36 - -
Lapu8g01087 778 SMART 26again6 574 601 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01087 Lapu-Chr8 28905736 28912580 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lapu8g01087 MULE 2.9e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01087 - - gmx:100793442 1416.36