Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01080 ATGAATCTGTTATGCCTTGCATTAACATTGATCCTACTACACGGGTCATCAAGAGCCAGAGAAGAAGCTTCCAGACGTGACGATGATGTCGTCAAAATCGGTGCCATATTCACATTGAAAACTATAAACGGACAAGTTTCGAAAATTGCCATCCAAGCTGCTGAGAAAGATGTAAATTCCGATCCTCGCATCCTGGGGGGACGTAAATTGTCCATAAACATCCACGATTCCAACTTCAATGGTTTTCTTGCCTTTATTGGGGCTCTCAAGTTCTTGATGACCGACACAGTTGCTATAATCGGTCCACAAACTTCGAGAATGGCCCATGTGGTTTCGCATCTTGCACATGAGCTCCATGTCCCCCTACTCTCCTTCACGGCTCTGGATCCCACCCTAACACCCCTCCAGTATCCTTATTTTGTCCAAACAGCTCCCAACGATCAGTTCCAGATGACTGCAGTTGCGGACATGATTAGTTATTATGGTTGGAGAGAAGTCATAGCAATATTCAGTGATGATGATCCCAGTCGAAATGGGGTAACTGTTTTGGGGGACAAACTTGCAGAGAGACGCTGTAAGTTGTCTTACAAAGCGGCACTGCCTCCTGATCCAACCGCCACTCCAAGCTTTGTTACCAGTCAGTTAAGGAAGATTAAGAGCATGGAGTCTCGAATAATAGTTTTACACACCTTCGCCAAAACTGGTCTCTTGGTTTTTGAGGTGGCTCAAAAACTAGAAATGATGACCGAAGGGTATGTCTGGATAGCTAGTACTTGGTTATCGACTGTTCTAGATTCAACCTCTGCTTCTCTACCTTCAAACTTTTCTAACTCAATTCTAGGAGTTCTTACCCTTCGCCCTCACACCCCTCAATCCATAAAAAAACAGGCATTTATCTCAAGGTGGAAACACATCAGTAATGGCTCAATTGGGTTAAATCCATACGGACTCTATGCGTATGATTCTGTCTGGATAATTGCTCAGGCACTAAAATTATTTTTTGATCAGAATGGAACCGTTTCATTTTCTAACAGTACGACTTTAAGTAGTTTTCGGAGCATCGGTTACTGGTCTAATTACTCTGGACTCTCAGTAATAACCCCTGAGAAACTTCAGTTGAAGCCTGCCAATCGTTCAATTTCAAACCAGCATCTGAAGCAAGTCTTATGGCCTGGAAATACTACGGAAAGGCCACGTGGATGGGTTTTCCCAAATAATGGGAGGCAACTGAGAATTGGAGTCCCCAACAGAGTTAGTTATAGAGCCATAGTCTCACAAGTAAATGGCTCCAATGCAGTTCAAGGATATTGCATAGATATATTCCTAGCTGCCATAAAACTTCTTCCATATGCGGTTCGGCATAAGTTCGTTCTGTTTGGAGATGGAAAAAATAACCCAAGCTACTATGATCTTGTCAACATGATTACTTCTGATGTTTTCGATGCTGCTGTAGGTGACATTGCTATTGTCACTGACCGAACAAAGATTGTGGATTTTACTCAACCATATATAGAATCGGGGCTAGTTGTAGTTGCTCCGGTAAAAAAATTGAAGTCGCATGCTTGGGCTTTCTTGCGACCATTTACTCCAATGATGTGGGGTGTCACTGCATTTTTTTTCCTTTTTGTTGGAGCAGTGGTGTGGATTCTTGAACATAGAACAAACGATGAGTTTCGGGGGCCGCCAAAGGAACAGATAGTTACAGTTCTTTGGTTTAGTTTCTCGACCATGTTCTTCTCGCACAGAGAAAACACAGTTAGTCCACTTGGTCGAATTGTGTTGATAATCTGGCTTTTTGTAGTTCTGATAATCAATTCAAGCTACACTGCAAGCTTGACATCAATTCTCACAGTGCAGCAGCTTTCTTCACCCATAACAGGAATCGATAGCTTAATATCCAGCAGTGAACGTATAGGGTTCCAAATAGGCTCGTTTGCTGCAAACTATCTAACTGAGCAACTCAACATCCCCAAACACAGACTTGTTCCTCTTGGCTCGCCAGAAGAATATGCCGTTGCCCTTGAAAGGGGGACTGTTGCAGCTGTGGTGGATGAACGGCCATATGTAGAACTTTTCCTTTCAAACCACTGCAAATTTTCAATCAGAGGCCAAGAGTTCACCAAAAGTGGGTGGGGATTTGCATTTCCCAGGGACTCTCCTTTTGCAGTTGATATGTCAACTGCCATTTTAACTTTATCTGAGAATGGTGAACTTCAGAGGATCCATGAAAAGTGGCTTTCAGAAAAGGCCTGTTCTCATCACAGTAGTGCGGATGAACAACTTCAATTAAATAGCTTCCGGGGCCTGTTTCTAATATGTGGAATAACATTTTTCGTGGCGCTTCTAATATACTTTTTATTAATGCTACGTCAATTCAGTAAAAAAAAACCTAAAATAGCTGGTCCTTCTAATCGTTACAGCTCGCGTTCTGCACGCATCCAAACATTTCTTGATTTCGTTGACGAGAAAGAAGACGTATCTCCCAGGAAATTAAAAAGAAAACTGGATTATATTTCATCAAATCGTCTGAGGAGCATATCAAAGAGCAAGAGCAAGAGCAGCAGTCAGAGAGTACAGGTGGAAATTTCCTAA 2592 0.424 MNLLCLALTLILLHGSSRAREEASRRDDDVVKIGAIFTLKTINGQVSKIAIQAAEKDVNSDPRILGGRKLSINIHDSNFNGFLAFIGALKFLMTDTVAIIGPQTSRMAHVVSHLAHELHVPLLSFTALDPTLTPLQYPYFVQTAPNDQFQMTAVADMISYYGWREVIAIFSDDDPSRNGVTVLGDKLAERRCKLSYKAALPPDPTATPSFVTSQLRKIKSMESRIIVLHTFAKTGLLVFEVAQKLEMMTEGYVWIASTWLSTVLDSTSASLPSNFSNSILGVLTLRPHTPQSIKKQAFISRWKHISNGSIGLNPYGLYAYDSVWIIAQALKLFFDQNGTVSFSNSTTLSSFRSIGYWSNYSGLSVITPEKLQLKPANRSISNQHLKQVLWPGNTTERPRGWVFPNNGRQLRIGVPNRVSYRAIVSQVNGSNAVQGYCIDIFLAAIKLLPYAVRHKFVLFGDGKNNPSYYDLVNMITSDVFDAAVGDIAIVTDRTKIVDFTQPYIESGLVVVAPVKKLKSHAWAFLRPFTPMMWGVTAFFFLFVGAVVWILEHRTNDEFRGPPKEQIVTVLWFSFSTMFFSHRENTVSPLGRIVLIIWLFVVLIINSSYTASLTSILTVQQLSSPITGIDSLISSSERIGFQIGSFAANYLTEQLNIPKHRLVPLGSPEEYAVALERGTVAAVVDERPYVELFLSNHCKFSIRGQEFTKSGWGFAFPRDSPFAVDMSTAILTLSENGELQRIHEKWLSEKACSHHSSADEQLQLNSFRGLFLICGITFFVALLIYFLLMLRQFSKKKPKIAGPSNRYSSRSARIQTFLDFVDEKEDVSPRKLKRKLDYISSNRLRSISKSKSKSSSQRVQVEIS* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01080 863 Gene3D - 713 745 - -
Lapu8g01080 863 FunFam Glutamate receptor 521 651 - -
Lapu8g01080 863 Gene3D - 397 520 - -
Lapu8g01080 863 CDD GluR_Plant 408 746 - -
Lapu8g01080 863 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 31 822 IPR015683 -
Lapu8g01080 863 Pfam Receptor family ligand binding region 49 332 IPR001828 -
Lapu8g01080 863 PIRSF IGluLR_plant 347 863 IPR017103 -
Lapu8g01080 863 PIRSF IGluLR_plant 1 351 IPR017103 -
Lapu8g01080 863 Gene3D - 146 311 - -
Lapu8g01080 863 Pfam Ligand-gated ion channel 748 776 IPR001320 GO:0015276|GO:0016020
Lapu8g01080 863 FunFam Glutamate receptor 405 521 - -
Lapu8g01080 863 Pfam Bacterial extracellular solute-binding proteins, family 3 428 747 IPR001638 -
Lapu8g01080 863 Gene3D - 681 712 - -
Lapu8g01080 863 SUPERFAMILY Periplasmic binding protein-like II 388 748 - -
Lapu8g01080 863 FunFam Glutamate receptor 146 307 - -
Lapu8g01080 863 SUPERFAMILY Periplasmic binding protein-like I 28 402 IPR028082 -
Lapu8g01080 863 Gene3D - 49 337 - -
Lapu8g01080 863 FunFam Glutamate receptor 647 750 - -
Lapu8g01080 863 Gene3D - 521 655 - -
Lapu8g01080 863 SMART GluR_14 409 748 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01080 Lapu-Chr8 28843377 28847776 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01080 1 857 Ion Channels AT2G17260 58.297 0.0 1050