Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01072 ATGGAGAAGGCAGGAGTACTGTCGGCGAAGGAGGCATTCGAGAAGCTTGAAAAGGTTGGAGAAGGGACGTACGGAAAGGTGTACAGGGCAAGAGAAAAGGCCACTGGGAAGATCGTTGCCCTCAAGAAGACTCGCCTCCATGAGGACGAAGAAGGTGTCCCTCCCACCACCCTCCGCGAGGTTTCCATTCTGCGGATGCTCTCTCGCGATCCCCATGTCGTCAGGTTAATGGATGTCAAACAAGGTCAGAACAAGGAAGGCAAGACAGTCCTCTACTTGGTATTTGAGTACATGGATACCGATCTCAAGAAATTCATTCGCTCTTTCCGTCAAACTGGAGAATCCATTCCACCCCAAACCATCAAGAGTTTGATGTACCAACTTTGCAAGGGCGTTGCTTTCTGCCACGGCCATGGAATCTTGCACAGGGACTTGAAGCCTCACAATCTCTTGATGGACCGGAAAACAATGATGCTTAAAATAGCTGATCTTGGACTTGCTCGAGCATTTACTGTACCAATTAAGAAATACACGCACGAGATACTTACCCTGTGGTATAGAGCCCCTGAAGTTCTTTTAGGAGCCACCCATTACTCAATGGCTGTGGATATATGGTCCGTTGCCTGCATATTTGCCGAACTTGTCACCAAACAAGCACTCTTTCCTGGTGATTCCGAGCTTCAACAACTTCTTCATATATTCAGGCTATTGGGCACTCCTAATGAAGAGGTGTGGCCAGGCGTGAGTAAACTAATGAACTGGCATGAATACCCCCAATGGAATCCTCAAAGTCTTTCAACGGCTGTTCCGAGTTTGGATGAGCTTGGAATCGACCTGTTATCTCAAATGTTGAAATATGAACCTTCCAAGAGGATTTCTGCGAAGAAAGCAATGGAACACCCCTACTTTGATGACCTGGACAAGAGGCACCTTTAG 936 0.4744 MEKAGVLSAKEAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDEEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGKTVLYLVFEYMDTDLKKFIRSFRQTGESIPPQTIKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMMLKIADLGLARAFTVPIKKYTHEILTLWYRAPEVLLGATHYSMAVDIWSVACIFAELVTKQALFPGDSELQQLLHIFRLLGTPNEEVWPGVSKLMNWHEYPQWNPQSLSTAVPSLDELGIDLLSQMLKYEPSKRISAKKAMEHPYFDDLDKRHL* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01072 311 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Lapu8g01072 311 FunFam Cyclin-dependent kinase 2 101 310 - -
Lapu8g01072 311 FunFam Cyclin-dependent kinase B2,2 9 99 - -
Lapu8g01072 311 Gene3D Phosphorylase Kinase; domain 1 8 99 - -
Lapu8g01072 311 SUPERFAMILY Protein kinase-like (PK-like) 11 306 IPR011009 -
Lapu8g01072 311 ProSiteProfiles Protein kinase domain profile. 13 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01072 311 SMART serkin_6 13 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01072 311 PANTHER CELL DIVISION PROTEIN KINASE 11 304 - -
Lapu8g01072 311 Pfam Protein kinase domain 13 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01072 311 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Lapu8g01072 311 Gene3D Transferase(Phosphotransferase) domain 1 101 310 - -
Lapu8g01072 311 Coils Coil 311 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01072 Lapu-Chr8 28676490 28678923 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01072 1 311 Core Cell Cycle Gene Families AT1G20930 85.397 0.0 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Lapu8g01072 Pkinase 2.4e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01072 K07760 - gmx:100808302 614.379