Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01069 ATGAACTGCTTTTGTTCTGGTGGTCGTGGGAAGGATGTGGGAATCGAGAGCAGTTTAGGGTCAAACTCAAAGACAAAGGCGAAGAAAGCGTCAGCAACGAGTTTCAGTTTCCGCGAGCTTGCATCGGCGGCGAGGGGTTTTAAGGAAGTGAACTTGATCGGGGAAGGAGGTTTTGGAAAGGTGTACAAGGGTCGTCTCTCCACAGGCCAGCTTGTGGCCATAAAACAATTACGTCTAGATGGTGAAACCCATCAGGGTAATCGGGAATTTGTGACGGAGGTTCTCATGTTGAGCCTCCTACACCATTCTAATCTTGTTAAATTATTTGGCTACTGCACCCACGGGGATCAGAGGCTTCTGGTTTACGAATACATGCCTATGGGGAGCCTGGAGCAGCATCTTTCGGCAGAGAAAAAACCTCTGGGTTGGAGAACTCGACTGAAGATTGGCGTGGGGGCTGCCCGGGGCCTCCAGTATCTGCACTGTGTAGCCAATCCTCCTGTTATCTATCGGGACTTGAAATCCGCCAACATCTTGCTAGACAACAATTTACACCCAAAACTCTCTGATTTTGGGCTTGCCAAGCTAGGACCTGTTGGAGACAATACCCATGTATCCACCAGAGTCATGGGAACCTATGGCTACTGTGCCCCCGAGTATGCCATGAGTGGCAAATTAACTCTTAAATCTGATATCTACAGCTTCGGCGTCGTCTTGCTCGAGTTGATCACCGGACGCAAGGCAATGGATGTCACTAGGAAACAACGGGAGCAAAGCCTGGTTGCATGGTCTCGGCCATATTTGAGCGACCGGAGAAAGGTTTCGCAGATCGTTGATCCTCTTTTGGAAGGAAACTACCCCTTACGTTGTTTGCACAATGCGATTGCTATCACTGCAATGTGCCTCCAGGAGCAACCCAATCTTCGTCCATCCATAGACGACATTGTTGTTGCATTGGAGTACCTGGCCTCTGAAACTGTCCGTGCACCTCGCCAATCACATCCTCCATCAGATACCCAAACTGACACACCCTAG 1035 0.4976 MNCFCSGGRGKDVGIESSLGSNSKTKAKKASATSFSFRELASAARGFKEVNLIGEGGFGKVYKGRLSTGQLVAIKQLRLDGETHQGNREFVTEVLMLSLLHHSNLVKLFGYCTHGDQRLLVYEYMPMGSLEQHLSAEKKPLGWRTRLKIGVGAARGLQYLHCVANPPVIYRDLKSANILLDNNLHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDVTRKQREQSLVAWSRPYLSDRRKVSQIVDPLLEGNYPLRCLHNAIAITAMCLQEQPNLRPSIDDIVVALEYLASETVRAPRQSHPPSDTQTDTP* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01069 344 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Lapu8g01069 344 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Lapu8g01069 344 SMART serkin_6 47 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01069 344 FunFam Serine/threonine-protein kinase CDL1-like 19 124 - -
Lapu8g01069 344 Gene3D Phosphorylase Kinase; domain 1 12 124 - -
Lapu8g01069 344 Pfam Protein kinase domain 47 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01069 344 PANTHER OS07G0668900 PROTEIN 24 331 - -
Lapu8g01069 344 FunFam Serine/threonine-protein kinase PBS1 125 337 - -
Lapu8g01069 344 Gene3D Transferase(Phosphotransferase) domain 1 125 338 - -
Lapu8g01069 344 PIRSF ILK 11 333 - -
Lapu8g01069 344 ProSiteProfiles Protein kinase domain profile. 47 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01069 344 CDD STKc_IRAK 53 320 - -
Lapu8g01069 344 SUPERFAMILY Protein kinase-like (PK-like) 27 320 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01069 Lapu-Chr8 28662098 28663307 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01069 11 336 Glycoside Hydrolase AT3G07070 56.456 6.51e-134 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lapu8g01069 Pkinase 1.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01069 - - gmx:100794722 552.747