Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01063 ATGGCGGGTCAGTGCTCCAATGAAGGCTCCAGTTCTGGAAATATTTCAGCAGAGTGTTCAGATTCAACTGTTCATCTCAATATCAAGACTCTAGATTCCCGCATCTACAATTTTCAAGTGGAAAAAAATATGCTTGTTTCGTTGTTCAAAGAGAAAATTGCAAATGAAATTGGTGTTCCAGTTAGTCAGCAACGACTGATATTTAGAGGAAAAGTCTTAAAGGATGAGCATGTTCTTTCTGAGTATCATGTTGAAAATGGGGATACATTGCATTTGGTTGAAAGACAACCAAATCAGCCGCAGGCTGCTGGTACGAGTGCTGATGAGCCAACTGGTACAAGTGGTAACCGAGGAAATGATGTGGGCTCAGGGCCTCCTCGTAACCGTGTTGGGCAAATTTCACACAGTGTTGTTCTTGGGACATTTAACGTGGGGGAGCAAGGTGAAGGAATTGTTCATGACCTCACTCGGGTTATTGGGCATGTTTTAAATTCTATTGGAAATGGTGGCCAGACTGCAGTTAATGGTCCTAATGCTGTGCAAACTTCTTCCGCTCACCCAGGCAATGAAACTGAAGGAATGCATGCTGGAAATCAAAATCCAGCTGGAAACCAAGCACCATCTGGACAGACATTTCATGGTCCGACATTCCAATCTGTGTCTCATGTTGTTCAGATTCCTGTTGCAGCAGGATCCATACCGCTCCCATCTCTCAATGCACCAATTCCTGATTCATTGAACACACTGATTGAGTTTATGAATCGCATGGAACAGACACTGACACAAAATGGTTATCAGTCAAATTTTTCACCAGCTAACCCTGGAGATCAACGAGTGGAATTGCCTTCTAATTCACAAGGGTTGCCGACTCTTGAAGCATTAAGTACTGTCCTGCGTCATGCAGAACGGTTACTTGGTGGTCAAGCTGTTGCTGCACTATCTCATATTGCAGGACGCTTGGAAAGAGAAGGAGCTTCTGCTGATCTACATTTAAGAGGTCAAATACAGTCAGAGTCAGTGCAAGTAGGACTTGCTATGCAACATTTGGGTGCACTTCTGCTTGAACTTGGGCGGACAATGCTGACACTGCGTATGGGACAATCTTCTGCAGAATCGGTTGTTAACGCTGGACCAGCTGTTTACATTTCTCCATCAGGGCCAAATCCTATAATGGCGCAGCCTTTTCCACTTCAGGCAAGCTCCCTCTTTGGCGGTCCAGTTCCCTCCTCAACTCCCACTCCTGTAACTTTAGGCACCATTGGTATTGGAAGTGCTCCTAGGAACGTAAACATTCATATACATGCTGGTACCTCTCTTGCACCAATTGTTTCAGCAATTGGTTCTAGGCCAAATAATGGAGAAGGGACAAGAAGTGAACAGCGTAATGAGCCTGGTTCTGGTGGTTCAGGTTCAACGCGGGTATTACCTGTCAGAAATGTCATAGCAGCAACTATCCCAGCACACCTTCCTGCTGTTGGAGTATCTAGTAGCACACAAACTGGGTTCGGTGTTTCTACATCACAGCCACCTGATTCAGCTTCATTGTCTTCTGTTTTAGCTGAAATTGATTCTCGCCTTAGGAATGTTGTTGGTAGTATGCAAGGAGATAACACAGTTCCATCAGGGGAAATGGAATCAATCAGCAGGGACTTGTCTTCTGGATCTGAATCAAGACCACCTACACTAAATGCACAGCAAGATACCATGGGGATGAATGGCTTTGGGGAAGCTGGTGCTTCCTTAGTTGGCTGTACTTCTGAAAGTGAGGTACAGAAGCTCCAAACTGAGGCAGTCCAAACCTCTAGTAATGATGAGAGAGATGTTTTGGTTGACAAATTTGTTTCAAGTTCTTCCAGACAAGATTTACAAAGTTGTTCTAGTGGAGAAACAGTAGTAAAACCTGAAAAAGACCAAGATGTTCCAGCTGTTAGTGACAGACAAGACGTAACTGAACCTGCCAAAGCTGCTCCATTAGGATTGGGTCTGGGTGGTTTAGAGCGTAAGAAGCGCACCAGACCTCAACCTCCTGTGAGTAAAGGTGCTGGTGAGGGATCATCCAGTTCTTCTGTCAATCAAAATCAGCAAACCAGAACAGATGGTCAACATATATTGCAAACTCTCGCAAGTCATGGATCTGCTTTGAATTCGAGAAATGCTAATGGGCCATCCCAGCAGTCCTTGCCCTCCAGTGATCGTTCGATTGATGTGGCTGGTTTAATGTCTCAGGCTTTACAGAGTCCTGCTTTGAATGGTTTGTTGGAAGGGGTTTCACAGCAAACCGGAGTTGACTCACCTGATGGTTTGAGGAATATGTTGCAGCAGTTCACGCAGAGCCCACAGTTGATGAATACAGTCAACCAAATTGTCCAACAGGTTGGCAGTCAAGATGTGGGGAATATGTTTGCTGGAGCGGAAAGAGGGCAGGGTGGTGGTATTGATATTTCAAGGATGTTTCAACAGATGATGCCCATTGTATCACGAGCTCTTGGTGGGGCAAATCCTTCCTCACTGTTCTCTGTTGAAGAAGCAGAACATGGTGCACCCTACCAAGATGGAACAGTTAACAGAGATGAATATTCTGATAATCAAAGTTTACAGCTCGACCTTCAACCACTGGCTGAGAGGATTGAGCATCTGCGTCCTTCTGTAGATATTTTCCGTGCTGTAGCTGAAAATGCTGTCCAGCTATCTGGCACTGGAAGCGCTTCTAATGATCTTCTGGATGAGTTGTGCCACAATGAGAGTCTTGCCAGGGAATATGTAGATATGTTGCGATGTGATTTAAGTAAGCTGCTCGAGGGACATTCTGAGGTGGACAAATTCTAA 2826 0.4501 MAGQCSNEGSSSGNISAECSDSTVHLNIKTLDSRIYNFQVEKNMLVSLFKEKIANEIGVPVSQQRLIFRGKVLKDEHVLSEYHVENGDTLHLVERQPNQPQAAGTSADEPTGTSGNRGNDVGSGPPRNRVGQISHSVVLGTFNVGEQGEGIVHDLTRVIGHVLNSIGNGGQTAVNGPNAVQTSSAHPGNETEGMHAGNQNPAGNQAPSGQTFHGPTFQSVSHVVQIPVAAGSIPLPSLNAPIPDSLNTLIEFMNRMEQTLTQNGYQSNFSPANPGDQRVELPSNSQGLPTLEALSTVLRHAERLLGGQAVAALSHIAGRLEREGASADLHLRGQIQSESVQVGLAMQHLGALLLELGRTMLTLRMGQSSAESVVNAGPAVYISPSGPNPIMAQPFPLQASSLFGGPVPSSTPTPVTLGTIGIGSAPRNVNIHIHAGTSLAPIVSAIGSRPNNGEGTRSEQRNEPGSGGSGSTRVLPVRNVIAATIPAHLPAVGVSSSTQTGFGVSTSQPPDSASLSSVLAEIDSRLRNVVGSMQGDNTVPSGEMESISRDLSSGSESRPPTLNAQQDTMGMNGFGEAGASLVGCTSESEVQKLQTEAVQTSSNDERDVLVDKFVSSSSRQDLQSCSSGETVVKPEKDQDVPAVSDRQDVTEPAKAAPLGLGLGGLERKKRTRPQPPVSKGAGEGSSSSSVNQNQQTRTDGQHILQTLASHGSALNSRNANGPSQQSLPSSDRSIDVAGLMSQALQSPALNGLLEGVSQQTGVDSPDGLRNMLQQFTQSPQLMNTVNQIVQQVGSQDVGNMFAGAERGQGGGIDISRMFQQMMPIVSRALGGANPSSLFSVEEAEHGAPYQDGTVNRDEYSDNQSLQLDLQPLAERIEHLRPSVDIFRAVAENAVQLSGTGSASNDLLDELCHNESLAREYVDMLRCDLSKLLEGHSEVDKF* 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01063 941 MobiDBLite consensus disorder prediction 615 697 - -
Lapu8g01063 941 MobiDBLite consensus disorder prediction 444 473 - -
Lapu8g01063 941 MobiDBLite consensus disorder prediction 493 515 - -
Lapu8g01063 941 MobiDBLite consensus disorder prediction 713 732 - -
Lapu8g01063 941 MobiDBLite consensus disorder prediction 168 215 - -
Lapu8g01063 941 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 9 937 - -
Lapu8g01063 941 SUPERFAMILY Ubiquitin-like 19 99 IPR029071 -
Lapu8g01063 941 MobiDBLite consensus disorder prediction 449 473 - -
Lapu8g01063 941 MobiDBLite consensus disorder prediction 615 631 - -
Lapu8g01063 941 SMART ubq_7 24 95 IPR000626 GO:0005515
Lapu8g01063 941 MobiDBLite consensus disorder prediction 532 566 - -
Lapu8g01063 941 MobiDBLite consensus disorder prediction 680 697 - -
Lapu8g01063 941 Pfam Ubiquitin family 26 96 IPR000626 GO:0005515
Lapu8g01063 941 Gene3D - 13 108 - -
Lapu8g01063 941 FunFam Large proline-rich protein BAG6 16 109 - -
Lapu8g01063 941 MobiDBLite consensus disorder prediction 97 121 - -
Lapu8g01063 941 MobiDBLite consensus disorder prediction 97 131 - -
Lapu8g01063 941 PRINTS Ubiquitin signature 34 54 IPR019956 -
Lapu8g01063 941 PRINTS Ubiquitin signature 55 75 IPR019956 -
Lapu8g01063 941 PRINTS Ubiquitin signature 76 97 IPR019956 -
Lapu8g01063 941 ProSiteProfiles Ubiquitin domain profile. 24 99 IPR000626 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01063 Lapu-Chr8 28608348 28620903 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01063 28 95 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 41.176 1.71e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01063 - - gmx:100783611 1531.15