Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01053 CTGAGATTCATGGGAGTGGGGTTCTCAAAGGTGTTAACTCACAAACCAGACAATGAAGTTCCAATTTCTTCCACAGATTCTGGTCCTCAACTCACCTACAAACAACCTCGCAAAAGCCTCCCTTTTCCACGTCCACTTCCTCCTCCCTTGCCAACCCAATGTTCTTCACAAACAGGACCTCTTCTGGGGAAGCCTTACGCTAAAATAAAGCACGTGTACGAGATGAAGAAAGAGCTGGGAAGAGGCAACTTTGGCGTGACTTATCTGTGTGTAGAGAAGGCCACGGGAGTTGCATATGCATGCAAATCCATAGCAAAGAAGGGGCCAGAACAAGTTGAGAATGTTAGAAGAGAGGTTATGATTCTGGAGCATCTGTCAGGGCAACATAACATAGTGGAATTCAAGGGAGCTTATGAGGACAGGGAGAACGCGCATCTGGTGATGGAGTTGTGCAGTGGAGGTGAACTCTTTCACCGTATTATTGCCAAAGGTAGACATTCGGAGCGTGAAGCAGCCACTGTGATGAGACAGATTGTGAGGGTTGTTGACGTGTGCCATTTCATGGGTGTGATGCATCGAGACCTCAAGCCAGAGAATTTCTTGTTCGCCACCAAGGACGAGGACGCCCCTTTGAAACTCACGGATTTTGGATCCTCTGTCTTCTTTGACCCTGGTGAGGTGTTTACAGATATTGTTGGAAATGCATATTACGTGGCTCCAGAGGTTTTGAAACGGAATTATGGCAAGGAGATAGATATTTGGAATGCAGGAGTCATTTTATACATCCTCTTGAGTGGGGTGCCTCCATTTTGGGCTGAAACCGAGAAAGGGGTATTTGATGATATTTTGGGTGGTAAGTTAGATATGGATAGCGAGCCATGGCCTTCCACATCGGACGCTGCAAAAGATTTGATCATAAAAATGCTTACTTATGACCCTAAGGAACGGATTACAGCTGCTGAGGCCCTTGAACATCCATGGTTGAAAGAAGGTGGTGAAGCATCAGAAAAGCATCCAGACAGTGTTGTTTTAATTAGGATGGAGAAGTTCAAAGCAATGAACCAGATGAAGAAGCTTGCTTTGAAGGTAATAGCAGAAAATCTCTCAGAGGAAGAAACAAAGGGCCTGAGACAAATGTTCAACAATATGGATACTGATGGCAGTGGCACTATCACATTTGAAGAACTCAAATCTGGATTATCCTCCAGATTGGGTTCCCTGCTTAGTGAATCTGAAATAAGGCAGCTAATGAATGCTATTAGTAATGACAAAAATGGAACCATTAACTACTGTGAATTCGTTGCTGCAACCATGGATCGGCATAAACTGGAGAAGGGGGGGAATTTGTTCAAGGCTTTTCAATACTTTGACAAGGATGACAATGGTTACATAACGCGAGAAGAATTTAGGGAAGCTATCTCTGAACACCAAATGGGAGATGAAGCTGCGATAGAAAAAGTCTTCGAGGATGTAGACTCGAACAAAGATGGGAAAATTAACTATGAGGAGTTCATGAGCATGATGAGAAACGAATGCTATTAA 1542 0.4397 LRFMGVGFSKVLTHKPDNEVPISSTDSGPQLTYKQPRKSLPFPRPLPPPLPTQCSSQTGPLLGKPYAKIKHVYEMKKELGRGNFGVTYLCVEKATGVAYACKSIAKKGPEQVENVRREVMILEHLSGQHNIVEFKGAYEDRENAHLVMELCSGGELFHRIIAKGRHSEREAATVMRQIVRVVDVCHFMGVMHRDLKPENFLFATKDEDAPLKLTDFGSSVFFDPGEVFTDIVGNAYYVAPEVLKRNYGKEIDIWNAGVILYILLSGVPPFWAETEKGVFDDILGGKLDMDSEPWPSTSDAAKDLIIKMLTYDPKERITAAEALEHPWLKEGGEASEKHPDSVVLIRMEKFKAMNQMKKLALKVIAENLSEEETKGLRQMFNNMDTDGSGTITFEELKSGLSSRLGSLLSESEIRQLMNAISNDKNGTINYCEFVAATMDRHKLEKGGNLFKAFQYFDKDDNGYITREEFREAISEHQMGDEAAIEKVFEDVDSNKDGKINYEEFMSMMRNECY* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01053 513 ProSitePatterns EF-hand calcium-binding domain. 492 504 IPR018247 -
Lapu8g01053 513 Gene3D - 354 508 - -
Lapu8g01053 513 ProSiteProfiles EF-hand calcium-binding domain profile. 371 406 IPR002048 GO:0005509
Lapu8g01053 513 ProSiteProfiles EF-hand calcium-binding domain profile. 408 443 IPR002048 GO:0005509
Lapu8g01053 513 CDD STKc_CAMK 72 327 - -
Lapu8g01053 513 MobiDBLite consensus disorder prediction 18 34 - -
Lapu8g01053 513 Gene3D Phosphorylase Kinase; domain 1 75 155 - -
Lapu8g01053 513 SUPERFAMILY EF-hand 367 508 IPR011992 -
Lapu8g01053 513 MobiDBLite consensus disorder prediction 40 54 - -
Lapu8g01053 513 SMART serkin_6 73 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01053 513 ProSiteProfiles EF-hand calcium-binding domain profile. 444 479 IPR002048 GO:0005509
Lapu8g01053 513 PANTHER SERINE/THREONINE-PROTEIN KINASE 69 504 - -
Lapu8g01053 513 MobiDBLite consensus disorder prediction 17 57 - -
Lapu8g01053 513 ProSiteProfiles EF-hand calcium-binding domain profile. 480 513 IPR002048 GO:0005509
Lapu8g01053 513 FunFam Calmodulin 1 365 511 - -
Lapu8g01053 513 Gene3D - 346 438 - -
Lapu8g01053 513 ProSiteProfiles Protein kinase domain profile. 73 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01053 513 FunFam Aurora kinase A 66 154 - -
Lapu8g01053 513 CDD EFh 449 509 IPR002048 GO:0005509
Lapu8g01053 513 SUPERFAMILY Protein kinase-like (PK-like) 54 349 IPR011009 -
Lapu8g01053 513 ProSitePatterns EF-hand calcium-binding domain. 457 469 IPR018247 -
Lapu8g01053 513 Gene3D Transferase(Phosphotransferase) domain 1 156 345 - -
Lapu8g01053 513 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Lapu8g01053 513 FunFam Calcium-dependent protein kinase 5 156 336 - -
Lapu8g01053 513 ProSitePatterns Protein kinases ATP-binding region signature. 79 107 IPR017441 GO:0005524
Lapu8g01053 513 SMART efh_1 375 403 IPR002048 GO:0005509
Lapu8g01053 513 SMART efh_1 412 440 IPR002048 GO:0005509
Lapu8g01053 513 SMART efh_1 448 476 IPR002048 GO:0005509
Lapu8g01053 513 SMART efh_1 483 511 IPR002048 GO:0005509
Lapu8g01053 513 Pfam EF-hand domain pair 376 437 IPR002048 GO:0005509
Lapu8g01053 513 Pfam EF-hand domain pair 449 509 IPR002048 GO:0005509
Lapu8g01053 513 Pfam Protein kinase domain 73 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01053 513 ProSitePatterns EF-hand calcium-binding domain. 384 396 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01053 Lapu-Chr8 28542209 28545346 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01053 17 510 EF-hand Containing Proteins AT4G04720 59.091 0.0 622
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lapu8g01053 Pkinase 5.6e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01053 K13412 - gmx:100792610 780.015