Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01044 ATGACGGCCACAACGCCGAATCACACCCTAACCGTGTCTGGGTGGGCAGCACATGATTCTTCAGGCAAGATTACCCCTTACACCTTCAAAAGAAGGGAGAACGGTGTCACTGATGTGACCATAAAGATCTTGTACTGTGGGATCTGCCACACTGATCTCCACTATGCGAAAGATGAATGGGGCATCACCATGTACCCTGTCGTACCTGGGCACGAGATCATCGGGGTGATAACTAAGACAGGAAGCGAGGTGAAGGGCTTCAAGGAAGGAGACAGAGTGGGTGTGGGGTGTATTGGAGCTTCATGTTTAGATTGCGAACATTGCAAGACCGACCAGGAAAACTACTGCGACAAGTTGACACTTTTGTACAACGGAATCTTCTGGGATGGCAGCATCACCTACGGTGGCTACTCCCAAGTCATTGTCGCAGATTACAGATATGTGGTACACATTCCGGCAAACCTACCACTGGATGCGGCGGCTCCTCTACTGTGCGCCGGAATAACAGTGTTCGCTCCCTTGAAAGATCACGGTTTGGTGGCATCGGGAGGGAAAAGGATTGGAGTGGTTGGTTTGGGAGGGCTGGGACACTTAGCCGTTAAATTTGGGAAGGCATTCGGGCACCATGTTACTGTGATCAGCACTTCTCCTTCGAAAGAGGCCGAAGCTAAGCAACGTTTGGGTGCTGATGATTTCATAATCAGCTCCAACCCTAAACAGTTACAGGATGCAAAGAGAAGCCTGGATTTCATATTGGACACTGTGTCTGCAGAGCACCCTCTCTTACCCCTCTTGGAATTACTGAAAGTAGAGGGCATCTTATTTCTGGTGGGAGCACCAGACAAGCCCCTCCAATTGCCTGCTTTTCCACTGATTTTTGGCAAGAGATCAGTGAAAGGAGGGATCATAGGAGGGATAAAAGAGACTCAGGAGATGCTGAATATCTGTGAGAAGTATAACATAACCAGCGACATTGAATTAGTCGCAGCAGACAGGATCAACGAGGCTCTCCAACGTCTTGCCAAGAATGATGTTCGCTACCGCTTCGTCATTGATATTGCTGGTGGCAGTTCCAACTTCTAG 1083 0.4912 MTATTPNHTLTVSGWAAHDSSGKITPYTFKRRENGVTDVTIKILYCGICHTDLHYAKDEWGITMYPVVPGHEIIGVITKTGSEVKGFKEGDRVGVGCIGASCLDCEHCKTDQENYCDKLTLLYNGIFWDGSITYGGYSQVIVADYRYVVHIPANLPLDAAAPLLCAGITVFAPLKDHGLVASGGKRIGVVGLGGLGHLAVKFGKAFGHHVTVISTSPSKEAEAKQRLGADDFIISSNPKQLQDAKRSLDFILDTVSAEHPLLPLLELLKVEGILFLVGAPDKPLQLPAFPLIFGKRSVKGGIIGGIKETQEMLNICEKYNITSDIELVAADRINEALQRLAKNDVRYRFVIDIAGGSSNF* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01044 360 Gene3D - 15 353 - -
Lapu8g01044 360 FunFam Cinnamyl alcohol dehydrogenase 166 323 - -
Lapu8g01044 360 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270|GO:0016491
Lapu8g01044 360 CDD CAD1 14 352 IPR047109 GO:0016616
Lapu8g01044 360 Pfam Alcohol dehydrogenase GroES-like domain 38 150 IPR013154 -
Lapu8g01044 360 Gene3D - 166 323 - -
Lapu8g01044 360 SUPERFAMILY GroES-like 17 183 IPR011032 -
Lapu8g01044 360 Pfam Zinc-binding dehydrogenase 194 316 IPR013149 -
Lapu8g01044 360 PANTHER ALDEHYDE REDUCTASE 7 354 IPR047109 GO:0016616
Lapu8g01044 360 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 321 IPR036291 -
Lapu8g01044 360 FunFam probable cinnamyl alcohol dehydrogenase 15 172 - -
Lapu8g01044 360 SMART PKS_ER_names_mod 19 351 IPR020843 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01044 Lapu-Chr8 28496359 28498131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01044 14 354 Monolignol Biosynthesis Gene Families AT2G21890 58.358 4.62e-143 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01044 K00083 - gmx:100820588 618.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g01044 8 28496359 28498131 Lapu8g01044 8 28496359 28498131 ECH