Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01009 ATGTCGGCCAAATGCAGCCAAATCCGACACATCGTTCGGCTCCGCCAGATGCTGCGACGCTGGCGCAACAAGGCTCGCATGTCTGCACACCGTGCACCGTCCGATGTGCCTGCAGGACACGTGGCAGTCTGCGTGGGCACCAATTTCACCAGATTCGTGGTCCGCGCAACTTACCTGAACCACCCTGTCTTCAAGAAACTCCTCCTCCAAGCTGAAGAGGAGTACGGTTTCACCAACCACGGCCCATTAGCTATTCCCTGCGATGAATCGCTCTTTCAAGAGGTTCTCCGGTTCATCTCCCGGTCTGAATTGGAAAAATCAAACCGGTTCATAAACATTGAACTCGACGACTTTAAACGACACTGCCACAGCATCAGCAACAACCTTGATTTCTGGCCGGAATCTCGACCGCTGCTACATGGTCCCAGTGACAAAACCATTTGGTAA 447 0.5302 MSAKCSQIRHIVRLRQMLRRWRNKARMSAHRAPSDVPAGHVAVCVGTNFTRFVVRATYLNHPVFKKLLLQAEEEYGFTNHGPLAIPCDESLFQEVLRFISRSELEKSNRFINIELDDFKRHCHSISNNLDFWPESRPLLHGPSDKTIW* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01009 148 Pfam Auxin responsive protein 13 98 IPR003676 GO:0009733
Lapu8g01009 148 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 26 95 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01009 Lapu-Chr8 28214723 28215607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01009 3 147 Calmodulin-binding Proteins AT4G34750 49.342 2.52e-43 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01009 K14488 - gmx:100789753 275.789