Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00989 ATGGTACGCGTTTTCCTCTTCTGCCTCATTTCCTTGTTATTATCTATACAAGGCACCCTTAGTCTTACTCCAAATGAGTCAATCCAAGGCAATAGGACCATGGTTTCTTCTGCTGGAACTTTTGAAGCTGGATTCTTCAAGTTTGGAAATTTACAAGGCCAATACTTTGGTATATGGTACAAGAACATATCACCAAGGACCATTGTGTGGGTGGCCAACAGAGATGCCCCAGTGAAAAACTCAACAGCATTTTTCACACTAGCAGAACAAGGAGGTCCTGTTATTCTTGATGCCTCAGGCAGTGTTGTGTGGTTCTCCAATTCATCAAGAACTGCTAAGAAACCAGTTATGCAGCTTCTAGACTCAGGAAATCTTGTTGTGAAAGATGGAGACGGCACAAAAAAACTTTTGTGGGAAAGTTTTGACTACCCTGGTGACACTTTCCTTGCAGGAATGAAACTTAGTACAAACTTAGTTACTGGTCCTTCTAGGTTTCTCACATCTTGGAAAAACGCTGAAGATCCTGGCTTTGGTGAGTTTTCATATCACATAGATGCTCATGGCTTTCCTCAACTGGTTACCACAAAGGGAGAACTCTTGTATAGTAGAGGAGGGTCATGGAACGGCTTTGTTTTCAGTGGAGTTTCTTGGCGAAGAATGCTTAAACTCGTAAATTTTTCTCTTGAGATTAAGGACGAGGAAATCATTTACCAATATAAAACCTTTGAGGAAGAAACAGTTACTAGGTTAGTGATCAATCCATCAGGTTTTGTGCAACGCTTGTTATGGTCGGGTGGCAACCGGGGTTGGGAGATTTTATCTACTCGTCCCATGGATCAGTGTGAATATTATGCCTTTTGTGATGTGAATTCCATGTGTAATGTTACCAACTCTCCTAAAATATGTACATGCTTGGAAGGTTTTGTGCCAAAGTTCTATGAAAAGTGGAGTTCACTAGATTGGTCTGGTGGGTGTGTTAGAAGAGTGAACTTGAGTTGTGATGGTGATGGGTTTAAGAAGTACACAGGAATGAAGTTGCCAGACACTTATTCTTCTTGGTATAACGAGAGTTTGAGCCTTGAGAAATGTGAGGCTTTGTGTTTGAAAAACTGCTCTTGCACAGCATATGCAAATATAGAAGTCAATGGGAGAGGGTGCTTGCTTTGGTTTGGTAACATTACGGACTTGACAAGGCACACAGACCAAGGACAAGATATCTACATACGACTTGCAGCTTCTGAGTTAGATCATGGAGGGAGTAACCAAAGCTTCGATAACAAGAATCTTGCAGGGATACTAGTAAGCATTGTTTTACTCGTCATGGTACTTGGATTGACCACATTCACATATATGAAGAGGAAGAAGCTGGCGAACAGAGAGGTGCTGAGAATATTTCACTGGAAGTATAAAAGGGAGAAGGAAGATGTGGAGCTATCAACAATATTTGATTTTTCAACCATCTCTACTGCTACAAATCACTTTCCACCCAGTCACATGTTAGGAGAAGGTGGCTTCGGACCAGTATACAAGGGTATACTGCAAGATGGGCAAGAGATTGCAGTCAAGAGACTTGCAAAAACTTCTGAACAAGGAGCAGAGCAGTTCAAAAATGAAGTCATGTTGATGGCAAAACTTCAACATCGCAATCTTGTAAAACTTCTTGGTTGTTCCATTCACCAAGAAGAAAGGCTCTTGATCTATGAATACATGCCCAACAGAAGCTTGGATTACTTTATTTTTGATTCAACTCAAAGTAAACAACTAGACTTGACAAAGCGCCTTCAAATTATTGATGGTATAGCTCGAGGGCTACTCTATCTTCATCAAGACTCTAGATTAAGAATCATCCACAGAGATCTCAAAGCTAGCAATATTCTTCTAGATAATGACATGAATCCAAAGATATCAGATTTTGGTTTGGCCAGAACATTTGGAGGAGATCAAGCTGAAGCCAATACAAATAGAGTGATGGGAACATATGGTTATATGCCTCCTGAATATGCTCTGCATGGACATTTTTCAATCAAATCTGATGTATTTAGCTTTGGTGTGATTGTACTGGAGATAATTAGTGGGAGAAAGAATCGAAATTTCCAAGACTCTGAGCACCATCTTAATCTTCTTAGTCATGCATGGAGATTGTGGATTGAAGAAAAGCCACTTGAGCTAATAGATGACCTATTAGATTATCCAACCACACCACTTGAAATACTTAGATGTATTCATGTGGGTCTATTGTGTGTGCAACAAACACCACAAAACAGACCCAACATGTCATCTGTGGTTTTAATGTTGAATGGTGAAAAGTTGTTGCCTGAGCCGAGTCCACCTGGGTTCTACACAGGAACAGCTCAGTTTCCTATTCAAGTAGAATCTTCTTCTAGAAGTTGTGGAGCTAGATCACAAAATGAAGTTACAGTGTCCTTGTTACAGCCACGATAG 2442 0.4038 MVRVFLFCLISLLLSIQGTLSLTPNESIQGNRTMVSSAGTFEAGFFKFGNLQGQYFGIWYKNISPRTIVWVANRDAPVKNSTAFFTLAEQGGPVILDASGSVVWFSNSSRTAKKPVMQLLDSGNLVVKDGDGTKKLLWESFDYPGDTFLAGMKLSTNLVTGPSRFLTSWKNAEDPGFGEFSYHIDAHGFPQLVTTKGELLYSRGGSWNGFVFSGVSWRRMLKLVNFSLEIKDEEIIYQYKTFEEETVTRLVINPSGFVQRLLWSGGNRGWEILSTRPMDQCEYYAFCDVNSMCNVTNSPKICTCLEGFVPKFYEKWSSLDWSGGCVRRVNLSCDGDGFKKYTGMKLPDTYSSWYNESLSLEKCEALCLKNCSCTAYANIEVNGRGCLLWFGNITDLTRHTDQGQDIYIRLAASELDHGGSNQSFDNKNLAGILVSIVLLVMVLGLTTFTYMKRKKLANREVLRIFHWKYKREKEDVELSTIFDFSTISTATNHFPPSHMLGEGGFGPVYKGILQDGQEIAVKRLAKTSEQGAEQFKNEVMLMAKLQHRNLVKLLGCSIHQEERLLIYEYMPNRSLDYFIFDSTQSKQLDLTKRLQIIDGIARGLLYLHQDSRLRIIHRDLKASNILLDNDMNPKISDFGLARTFGGDQAEANTNRVMGTYGYMPPEYALHGHFSIKSDVFSFGVIVLEIISGRKNRNFQDSEHHLNLLSHAWRLWIEEKPLELIDDLLDYPTTPLEILRCIHVGLLCVQQTPQNRPNMSSVVLMLNGEKLLPEPSPPGFYTGTAQFPIQVESSSRSCGARSQNEVTVSLLQPR* 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00989 813 Gene3D - 16 141 IPR036426 -
Lapu8g00989 813 ProSiteProfiles Protein kinase domain profile. 494 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00989 813 Gene3D Transferase(Phosphotransferase) domain 1 570 771 - -
Lapu8g00989 813 Gene3D Hepatocyte Growth Factor 331 412 - -
Lapu8g00989 813 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 458 569 - -
Lapu8g00989 813 Pfam Protein tyrosine and serine/threonine kinase 498 762 IPR001245 GO:0004672|GO:0006468
Lapu8g00989 813 PIRSF SRK 1 813 IPR024171 GO:0004674
Lapu8g00989 813 ProSitePatterns Serine/Threonine protein kinases active-site signature. 615 627 IPR008271 GO:0004672|GO:0006468
Lapu8g00989 813 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 15 141 - -
Lapu8g00989 813 ProSiteProfiles Bulb-type lectin domain profile. 19 140 IPR001480 -
Lapu8g00989 813 Pfam PAN-like domain 333 396 IPR003609 -
Lapu8g00989 813 SMART blect_4 25 144 IPR001480 -
Lapu8g00989 813 CDD B_lectin 25 144 IPR001480 -
Lapu8g00989 813 CDD STKc_IRAK 500 767 - -
Lapu8g00989 813 SMART serkin_6 494 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00989 813 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 570 773 - -
Lapu8g00989 813 CDD PAN_AP_plant 329 411 - -
Lapu8g00989 813 SUPERFAMILY alpha-D-mannose-specific plant lectins 68 175 IPR036426 -
Lapu8g00989 813 Pfam D-mannose binding lectin 67 170 IPR001480 -
Lapu8g00989 813 SMART ntp_6 333 410 IPR003609 -
Lapu8g00989 813 Pfam S-locus glycoprotein domain 203 312 IPR000858 GO:0048544
Lapu8g00989 813 ProSiteProfiles PAN/Apple domain profile. 333 411 IPR003609 -
Lapu8g00989 813 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 5 756 - -
Lapu8g00989 813 SUPERFAMILY Protein kinase-like (PK-like) 479 778 IPR011009 -
Lapu8g00989 813 Gene3D Phosphorylase Kinase; domain 1 467 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00989 Lapu-Chr8 27990441 27994638 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00989 482 794 Receptor kinase-like Gene Family AT4G23140 56.418 8.74e-126 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu8g00989 PK_Tyr_Ser-Thr 1.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00989 - - var:108337036 1457.97