Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00975 ATGGCAAGATCTATGGAGCTTCCAGATTGTGTATATCCTAGGCCACCACTAACCATCCTCCCATGTGCTCCAACACCAAAGCATTCTCTCCATTTATCCAATCTTGACAACCAAAAGTTCCTCATATTACACATTGAATGTGTGTTCCTCTTCAAGAAATCTGTGAGCTTGGATGTGTTGAAGTCTTCTCTATCAAGAGTTTTGGTGTATTACTACCCCTTAGCTGGAAGGTTGAGGAGGAGCAACATTTGTGAGGATGATCACAAGCTTGAGGTGGATTGCAATGCAAAAGGTGTTGTGTTTGCTGAGGCTTTCATGGATGTCACTGCTGGACAATTACTTGAACATTGTAAGCTACTAAACAATTCATGGACGAAATTTCTTTACAAGGTCGAAGCTGATAGTTTCTTTGATGTTCCTCCTCTTGTAATCCAGGTGACAAGTCTCCGATGCGGAGGGATGATCCTATGTACAGCGATCAACCATTGTCTATGTGATGGCATTGGTGCCTCCCAATTTTTACATGAATGGGCCCACCTCACTAGAGAAGAGCCCAACACTGAATTACTAATCACACCTTTCCACGAGCGACACATGTTAAATCCTCGAGACCCTCCCCAAGTAGATTTCACCCACACAGCATACACTAGAACAATCCCTGCACCTCATCAAATGAACTTGTATAGGTCAACAATATATTCACAGTCGTTGGTTGCCATGTCGTTCATGTTTGGACCTTCTCAGGTGCTTCATTTGAAGAAACAGTGTTTATCGTGGCCGAAACACATCACCACCTTCGAAATTGTGGCAGCACACATGTGGCGTGCGTGGGTTAAGTCACTAAATCTCTGTCAAACTTTAACCGTTAAGCTCATTTTCTCCGTTAACATTAGAAAAAAGGTTAACCTCCCCGAAGGGTATTATGGGAACGGGTTTGTTCTAGCATGCGCGGAAACCACTGTGAAAGATTTAGTGGCAAATGGTGATAATATCAGTCATGGTTTGAAAGTGTTGCAACAAGCTCATGCTAGTTTGGATGAGGAAGGATATGTAAGGTCAATGGTTGATTTGTTGGAGGACAAAACCGTGTCTCTTGATCTTTCCACAAGCTTGGTTATATCACAATGGACAAGGTTAAGGCTCGAGGATGTGGATTTCGGATTAGGAAAACCGTTGTATATGGGTCCTTTAAGAAGTTATGTTTCTGGTTTGTTTTTACCGGTGGTTGGAGTTGCTAATGCTGTTAGTGTTGTTGTGTCAATTCCGGAAAGTGTTGTGGAAAGTTTTCGCTATCATATGTTGGTGAAATAG 1311 0.4249 MARSMELPDCVYPRPPLTILPCAPTPKHSLHLSNLDNQKFLILHIECVFLFKKSVSLDVLKSSLSRVLVYYYPLAGRLRRSNICEDDHKLEVDCNAKGVVFAEAFMDVTAGQLLEHCKLLNNSWTKFLYKVEADSFFDVPPLVIQVTSLRCGGMILCTAINHCLCDGIGASQFLHEWAHLTREEPNTELLITPFHERHMLNPRDPPQVDFTHTAYTRTIPAPHQMNLYRSTIYSQSLVAMSFMFGPSQVLHLKKQCLSWPKHITTFEIVAAHMWRAWVKSLNLCQTLTVKLIFSVNIRKKVNLPEGYYGNGFVLACAETTVKDLVANGDNISHGLKVLQQAHASLDEEGYVRSMVDLLEDKTVSLDLSTSLVISQWTRLRLEDVDFGLGKPLYMGPLRSYVSGLFLPVVGVANAVSVVVSIPESVVESFRYHMLVK* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00975 436 Gene3D - 229 433 IPR023213 -
Lapu8g00975 436 Gene3D - 14 217 IPR023213 -
Lapu8g00975 436 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 19 424 - -
Lapu8g00975 436 Pfam Transferase family 18 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00975 Lapu-Chr8 27885156 27887149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00975 19 421 Monolignol Biosynthesis Gene Families AT5G48930 29.535 2.90e-46 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00975 - - gmx:100797134 613.224