Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00949 ATGTTTCATCGTTGGAACAATTCTGCTCAACAAGGCCAGGAAAGCAGCGAGCTTTATGCTGAATCAAAGATTAAGGAGCTGAAGGGTGCAATTGGACCCTTATCAGGGCGCAGTTTGATGTATTGCAGTGATGCATGTTTGAAGAGATATTTGGAAGCTCGAAACTGGAATGTAGACAAGTCCAAGAAGATGTTGGGGGAGACTCTCAAGTGGAGATCAACCTATAAACCAGAGGAAATTCGCTGGCAAGAGGTTGCAATGGAAGGGGAGACTGGGAAATTGTATAGAGCCAGTTTTCGTGATAGACAAGGAAGAAGTGTTCTTATTTTGAGACCAGGAATGCAGAACACTACTTCAATGGAGAATCAGATGCGGCATTTTGTGTATATTTTGGAAAACGCCATGCTTGACCTTCCACCGGGCCAAGAACAAATGGCATGGTTGATAGACTTCACTGGGTGGTCAATAACCAACAATGTGCCCTTGAAATCAGCCAGAGAGACCATCAACATTTTGCAGAACCATTACCCTGAGAGGCTTGCCATAGCCTTTCTTTACAACCCCCCTCGAGTTTTTGAAGCCTTTTGGAAGATAGTTAAGTACTTCTTGGATAGCAAGACATTTCAGAAGGTGAAGTTTGTGTACCCGAAGAACAAAGACAGTGTGGAGCTCATGAAGTCTTATTTTGATGAGGAAAACCTTCCCAAAGAACTAGGTGGAAAAAGCACAATGCGTTATAACCACGAGGAGTTCTCCAGATTAATGGTTCAGGATGATTTGAAATGTGCAGCATTTTGGGGATCTGATGAGAAGCTCGCAAACCACATTGCTAATGGGCATTCTGCAGCAGTTTTCAATGAAACCTCACCTGACGCATGTTAA 882 0.4342 MFHRWNNSAQQGQESSELYAESKIKELKGAIGPLSGRSLMYCSDACLKRYLEARNWNVDKSKKMLGETLKWRSTYKPEEIRWQEVAMEGETGKLYRASFRDRQGRSVLILRPGMQNTTSMENQMRHFVYILENAMLDLPPGQEQMAWLIDFTGWSITNNVPLKSARETINILQNHYPERLAIAFLYNPPRVFEAFWKIVKYFLDSKTFQKVKFVYPKNKDSVELMKSYFDEENLPKELGGKSTMRYNHEEFSRLMVQDDLKCAAFWGSDEKLANHIANGHSAAVFNETSPDAC* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00949 293 SMART CRAL_TRIO_N_2 43 68 IPR011074 -
Lapu8g00949 293 PANTHER GH16843P 9 272 - -
Lapu8g00949 293 Pfam CRAL/TRIO domain 100 240 IPR001251 -
Lapu8g00949 293 SUPERFAMILY CRAL/TRIO N-terminal domain 21 84 IPR036273 -
Lapu8g00949 293 FunFam Phosphatidylinositol transfer protein 3 3 275 - -
Lapu8g00949 293 Pfam CRAL/TRIO, N-terminal domain 34 65 IPR011074 -
Lapu8g00949 293 Gene3D - 4 273 IPR036865 -
Lapu8g00949 293 SMART sec14_4 88 243 IPR001251 -
Lapu8g00949 293 CDD SEC14 100 241 IPR001251 -
Lapu8g00949 293 SUPERFAMILY CRAL/TRIO domain 82 256 IPR036865 -
Lapu8g00949 293 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 82 246 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00949 Lapu-Chr8 27667949 27670384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00949 47 235 Acyl Lipid Metabolism Gene Families AT1G55840 28.638 4.93e-12 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00949 K26544 - gmx:100790867 543.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00949 8 27667949 27670384 Lapu8g00949 8 27667949 27670384 ECH