Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00927 ATGAATCATGTTGCATTTCTCTTCACAATAACCTTTTTTCTTCTTTCTTTTAATGGGAAAGCACAGCAAAATTACTCTGGGAATTCAATATTGAGCTGCAAGAATGATGACAAAATGGGGCCCTCACCTTCATTCCTTTATACCTGCAATGGCCTCAACAAATCCTGCATGGCCTTCCTAATCTTCAAATCCAGACCTCCTTTCAATTCCATACTCACAATTTCCAACCTCACATCATCAAACCCAGAAGAGCTTGCAAGAATCAATGATGCCACAGTGCTCACAGTGTTCCCGACTGGAAAAGAAATGATTGTCCCTTTGAACTGTTCTTGTTTAACTAGGGACTATTACCAAGCTGAAATCGAATATGTATTGGGACCATCCCCAACATATTTCACAGTGGCAAATGATACTTTTCAGGGTTTGACCACTTGTGATTCGCTTAAGCGTGCTAATCCATATGGGGAACTTGATTTGCTTCCCGGCATGGAATTGCACGTGCCACTCAGATGTGCTTGTCCAACAGGGCATCAGGTCACAAACGGCACCAAGTATTTACTGACATACTCAGTGAACTGGGGTGATAACATCACAAATATTGCTACAAGGTTCAATGTAGCAGCAGGTATTGTGGTTGATGCAAATGGTTTTAGCACACAAACACAACTTCTTTATCCGTTCACAACTGTTCTGATCCCTTTGACAAGTGAACCTCTGAGTTCAATGACCACAGTTGTTAGTGATCCACCAAATATGTCACCTCTCCTTGTTTGCAGCTCCATAAAGTGCAAGTCAAAGAGGAAATTCCACACTGCTATTGCCACCACAGGGGGTTCCATTGTGGTTCTGTGTGCGGTCCTGTATGGGGTTTTTCTGTTCAGAAAGAGATCTGAAAGGTTTGTTAAGAGAGGTGAAGAAGGTGAGAAAGCAAAGAAGTTATCTTCAGATGATATCCGTGGTGAGATAGCAATCATTGAACATCATTCCAAAGTCTACAAGTTTGAGGAAATAAAGGAGGCCACTGAAAATTTTAGTTCAAAGAATAGAATTAAAGGTTCTGTGTTTCGTGGGGTATTTGGTAATGACAAAAACATATTGGCTGTGAAAAAAATGAGAGGAGATGCATCCAAGGAAGTGAATTTGCTGAAAAGGATCAATCATTTCAACCTGATAAAGCTGCAAGGTTACTGTGAAAACCATGCTTGTACTTATCTAGTTTATGAGTATATGGAAAATGGCTCTTTGAGAGAATGGCTAAACGAAAACAGGACTACCGAGCATCAGATTTTGGCAAAGAGGATCCTGATTGCTCTGGATATTGCCAACGGTCTTCAGTATCTTCACAACTTCACAGAACCTTCCTATGTGCACAGGAACATAAACAGTGAAAACATTCTTTTAAACAAAGATCTTAGAGCCAAGATAGCAAATTTTGCTCTCATTGAAGAATCAGAAAAGAAAATAACTTCCAGTTGTGCCTTATCAAGTGTGGCAAGGGGTTATATGGCTCCAGAGTATTTGGAGGCAGGGATGGTTACTACCAAAACGGACGTTTATAACTTCGGAATGGTGCTGTTGGAATTGATCACAGGTAAAGATTCTGTTACCCTACAAGATGGGAGAGAAGCAATGCTTCACATAGTCATAGTAAACCTCATTGGTAAAGAGAGTGAAGAAGAGAAAGTGAGTTTGTTCGTTGATCCTAGCTTCACTGGAAACAATGAGAAAGTGTGTGCTCTCCAGTTAGTCAAATTAGGTCTAGCCTGCTTAATTCAAGAACCAGAAGAGAGACCAACCATGGTAGCGGTAGTCTCTAGCTTATTAAAAATATATGTAAGTTATATAGACCAAATAATACCACTTAGCATTAGCAATAGTCTTGGCATGGAGAGGTGA 1896 0.403 MNHVAFLFTITFFLLSFNGKAQQNYSGNSILSCKNDDKMGPSPSFLYTCNGLNKSCMAFLIFKSRPPFNSILTISNLTSSNPEELARINDATVLTVFPTGKEMIVPLNCSCLTRDYYQAEIEYVLGPSPTYFTVANDTFQGLTTCDSLKRANPYGELDLLPGMELHVPLRCACPTGHQVTNGTKYLLTYSVNWGDNITNIATRFNVAAGIVVDANGFSTQTQLLYPFTTVLIPLTSEPLSSMTTVVSDPPNMSPLLVCSSIKCKSKRKFHTAIATTGGSIVVLCAVLYGVFLFRKRSERFVKRGEEGEKAKKLSSDDIRGEIAIIEHHSKVYKFEEIKEATENFSSKNRIKGSVFRGVFGNDKNILAVKKMRGDASKEVNLLKRINHFNLIKLQGYCENHACTYLVYEYMENGSLREWLNENRTTEHQILAKRILIALDIANGLQYLHNFTEPSYVHRNINSENILLNKDLRAKIANFALIEESEKKITSSCALSSVARGYMAPEYLEAGMVTTKTDVYNFGMVLLELITGKDSVTLQDGREAMLHIVIVNLIGKESEEEKVSLFVDPSFTGNNEKVCALQLVKLGLACLIQEPEERPTMVAVVSSLLKIYVSYIDQIIPLSISNSLGMER* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00927 631 ProSiteProfiles LysM domain profile. 187 232 IPR018392 -
Lapu8g00927 631 ProSiteProfiles Protein kinase domain profile. 295 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00927 631 Pfam Protein tyrosine and serine/threonine kinase 370 607 IPR001245 GO:0004672|GO:0006468
Lapu8g00927 631 Gene3D Transferase(Phosphotransferase) domain 1 410 618 - -
Lapu8g00927 631 FunFam PTI1-like tyrosine-protein kinase 3 410 618 - -
Lapu8g00927 631 Gene3D Phosphorylase Kinase; domain 1 305 409 - -
Lapu8g00927 631 Gene3D LysM domain 177 244 IPR036779 -
Lapu8g00927 631 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 5 613 - -
Lapu8g00927 631 SUPERFAMILY Protein kinase-like (PK-like) 327 607 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00927 Lapu-Chr8 27463924 27465843 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00927 4 610 Receptor kinase-like Gene Family AT2G23770 38.095 3.87e-125 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lapu8g00927 PK_Tyr_Ser-Thr 3.1e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00927 - - gmx:100806221 1038.1