Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00909 ATGCCTCTTTCTCGAAAATCGCTTTCCGCCGGAGCCCACCGGAACGACGCCGAACCCGATGACTATGCTCCGGCGCGGCGGTTGACTAGGCAGAGGAATCTTCGCCACCTCAGCGACCATGACATTGGCTTCTCCTTCTTCCACTCCGCCGAGTTTTCTTCGTCTTTTTCTGCCTCGCCGGAGCCTCGCTCCCATGGTGGTTCCGACCACCGGTCCCTCTCTTATCTGCCGCAACCGCTGCCTCTTCCCGAAGCGCCGTTGACCCGTCGAGCCAAGTCAATCAGTTCCCGTTCCGCACATCCTCCACTCTCTTCTTCCTTAGAACATCGTAGTTTTTCTTCTTCGAGGAACGCTTTGCCTCATGATGCAGTGTCAGTGACAGTTACACGTACAAAACCTACACTGCATTTGGATTCTACTCTTGCAAATGCAAAATACAATCTCAGAGAGCATGTTCCTGCTGCAAGTTTCTTGACAGGCCATACTTCATGGAAAAACCGAAGAGCAGTGTCTCATGGTAATGACTTTGAAGGTAATCCTCACTTCAATTTGGGTGTTGCTGCCAAGCCCAAGAGTGCTCCAACAAGTGTAGTCACAAGTCCTGATACTAGTCCTTATAGATCAAATAATGTTGATTTCTTTGATCCAACCTTCAACCTCTCTTTGGAAGTTAATGAAAAATTGAAAATGTTATCAGCTAAAAGTGTACATAGTTTCGACCATTCCCCTATTCATTGCCCTCTAAGCCTCACTCGTTACTTCAATCCTAAAATTGAGGAGGGATCTCAGAACCATAGATCTTTGTCCAAGGTGAGCCCTGAAAATAACCACGTTGATGCTCATCCCTTGCCTCTTCCTCCTAGAGCTTCATCGCCTGCACAACTATCTATGCTGCATCAATCAAGTACCATCCATCATGCTACTGAAAATATGCCTTCAGTCAAAGGCCAATGGCAGAAAGGAAAACTTATTGGACGAGGAACCTTTGGAAGTGTTTTTCATGCAACCAACCTAGAAACTGGAGCCTCGTGTGCAATGAAGGAGGTCAATTTAATTCCTGATGATCCTACATCTGTTGAGTGCATGAAACAACTGAACCAGGAAATCAAAATTCTTCATCAACTAAACCACCCCAACATTGTGCGGTATTATGGAAGTGAAATAGTTGGCAATCATTTGTACATATATATGGAGTATGTCCATCCAGGATCAATCAGTAAATTTATGCGTGAGCATTGTGGAGCTATGACAGAATCTGTGGTTCGCAATTTTACGAGACATATTCTCTCTGGATTAGCTTACTTACATTGTAACAAAACCATCCACAGAGATATTAAAGGGGCAAACTTGCTAGTCAATGAATCAGGCACTGTGAAACTTGCAGACTTTGGGCTGGCAAAAATTTTGATGGGGAATTCATATGATCTCTCTTTAAAGGGTAGTCCTTACTGGATGGCTCCAGAGGTCGTGAAAGGTGCCATAAAGAACAAATCTAATCCTGATGTTGTCATGGGCATTGACATATGGAGCTTAGGGTGCACCATTATAGAAATGTTAACAGGCAAACCTCCTTGGAGTGAAGCTGAAGGGCCTTCAGCCATGTTCAAGGTACTGCAAGAGTCCCCACCTATACCTGAAACTTTATCATCAGTGGGAAAGGATTTCCTCCAGAAATGTTTCCAAAGGGACCCTGCAGATCGACCATCTTCATCAATGCTTCTTAAGCATGCCTTTGTGCAGAATTTGCATGATCAAGATGTTTTAGGCCATCCACAATCTTGTCCTAGAGGAGACCTTGGACCAGGAGGCAATTCAGCTATTCCTAGAGATACTACCACGAATAGAAGTGGCATCATGCAAGCCTCCATTAGCTCAAGGTGA 1881 0.4492 MPLSRKSLSAGAHRNDAEPDDYAPARRLTRQRNLRHLSDHDIGFSFFHSAEFSSSFSASPEPRSHGGSDHRSLSYLPQPLPLPEAPLTRRAKSISSRSAHPPLSSSLEHRSFSSSRNALPHDAVSVTVTRTKPTLHLDSTLANAKYNLREHVPAASFLTGHTSWKNRRAVSHGNDFEGNPHFNLGVAAKPKSAPTSVVTSPDTSPYRSNNVDFFDPTFNLSLEVNEKLKMLSAKSVHSFDHSPIHCPLSLTRYFNPKIEEGSQNHRSLSKVSPENNHVDAHPLPLPPRASSPAQLSMLHQSSTIHHATENMPSVKGQWQKGKLIGRGTFGSVFHATNLETGASCAMKEVNLIPDDPTSVECMKQLNQEIKILHQLNHPNIVRYYGSEIVGNHLYIYMEYVHPGSISKFMREHCGAMTESVVRNFTRHILSGLAYLHCNKTIHRDIKGANLLVNESGTVKLADFGLAKILMGNSYDLSLKGSPYWMAPEVVKGAIKNKSNPDVVMGIDIWSLGCTIIEMLTGKPPWSEAEGPSAMFKVLQESPPIPETLSSVGKDFLQKCFQRDPADRPSSSMLLKHAFVQNLHDQDVLGHPQSCPRGDLGPGGNSAIPRDTTTNRSGIMQASISSR* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00909 626 SUPERFAMILY Protein kinase-like (PK-like) 302 591 IPR011009 -
Lapu8g00909 626 ProSitePatterns Protein kinases ATP-binding region signature. 324 347 IPR017441 GO:0005524
Lapu8g00909 626 MobiDBLite consensus disorder prediction 587 626 - -
Lapu8g00909 626 Pfam Protein kinase domain 319 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00909 626 MobiDBLite consensus disorder prediction 57 118 - -
Lapu8g00909 626 MobiDBLite consensus disorder prediction 606 626 - -
Lapu8g00909 626 MobiDBLite consensus disorder prediction 91 118 - -
Lapu8g00909 626 ProSiteProfiles Protein kinase domain profile. 318 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00909 626 MobiDBLite consensus disorder prediction 1 26 - -
Lapu8g00909 626 FunFam Mitogen-activated protein kinase kinase kinase 5 315 616 - -
Lapu8g00909 626 SMART serkin_6 318 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00909 626 MobiDBLite consensus disorder prediction 11 26 - -
Lapu8g00909 626 MobiDBLite consensus disorder prediction 261 296 - -
Lapu8g00909 626 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 59 590 - -
Lapu8g00909 626 Gene3D Transferase(Phosphotransferase) domain 1 308 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00909 Lapu-Chr8 27238507 27243910 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00909 278 581 MAP Kinase Kinase Kinase AT5G66850 65.132 4.86e-145 434
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lapu8g00909 Pkinase 2.2e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00909 - - gmx:100819530 931.784