Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00908 ATGAGAGCAACCAAACAATGCTCTTCTTCATCCTCTTCTCTTTCTTCTACTTCTGAGTTCAACCCTAATCATAACGATAATAATAACAACAATTGTGTTAGAATAAAAGGATCGTGGAGTGCGGAAGAGGATAGGGTTCTGACTGGGCTTGTGGAGGCCCATGGGCCGAGAAACTGGGCCCTGATAAGCCGACACGTAAAGGGCCGGTCTGGGAAGTCCTGCAGGCTTCGGTGGTGCAACCAGCTGAGTCCCGCGGTGGAGCACCGACCTTTCACCACGCGCGAGGACGCGATTATCCTGCACGCGCACCAACGGCTCGGGAACAAGTGGGCCACCATTGCGAGAATGCTTCCGGGCCGGACCGATAACGCCGTTAAGAACCACTGGAACGCCACGCTCAAGCGCAGGGCCTCCCAACGGCGTCGTTTCGGGGATGAAGTGAGGGATGAACCGTTGACTGCGTTGACTCTGGCGCCGCCGGGGAGTGGGGGCAGCGCCGGAGATTCGACGGCGGCGCTTTGGGATGTGGTTGCGAGGGAAGTGAGAGAATATGTTTCTTCCTCGTTTTCTGTCAAC 576 0.5625 MRATKQCSSSSSSLSSTSEFNPNHNDNNNNNCVRIKGSWSAEEDRVLTGLVEAHGPRNWALISRHVKGRSGKSCRLRWCNQLSPAVEHRPFTTREDAIILHAHQRLGNKWATIARMLPGRTDNAVKNHWNATLKRRASQRRRFGDEVRDEPLTALTLAPPGSGGSAGDSTAALWDVVAREVREYVSSSFSVN 192
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00908 192 SUPERFAMILY Homeodomain-like 35 129 IPR009057 -
Lapu8g00908 192 Gene3D - 35 87 - -
Lapu8g00908 192 CDD SANT 90 133 IPR001005 -
Lapu8g00908 192 FunFam MYB transcription factor 36 87 - -
Lapu8g00908 192 CDD SANT 38 80 IPR001005 -
Lapu8g00908 192 Pfam Myb-like DNA-binding domain 36 82 IPR001005 -
Lapu8g00908 192 Pfam Myb-like DNA-binding domain 90 130 IPR001005 -
Lapu8g00908 192 PANTHER MYB PROTEIN-RELATED 36 142 - -
Lapu8g00908 192 SMART sant 87 135 IPR001005 -
Lapu8g00908 192 SMART sant 35 84 IPR001005 -
Lapu8g00908 192 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 36 86 IPR017930 -
Lapu8g00908 192 MobiDBLite consensus disorder prediction 1 31 - -
Lapu8g00908 192 Gene3D - 89 150 - -
Lapu8g00908 192 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 88 137 IPR017930 -
Lapu8g00908 192 ProSiteProfiles Myb-like domain profile. 83 133 IPR001005 -
Lapu8g00908 192 ProSiteProfiles Myb-like domain profile. 36 82 IPR001005 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lapu8g00908 Lapu-Chr8 27235338 27236171 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00908 34 138 MYB Transcription Factor Family AT2G23290 72.381 1.50e-52 169
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lapu8g00908 Myb_DNA-binding 1.5e-14 CL0123