Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00905 ATGAGTCCAATGTTGTCAATGAACATTCTTCTGTGGTTCATGGTTTTGTCTTGGTGGCACTTTGGCATCTCATGCGAGGCAAACAAACAAGGGGAATATCTGCACAAGTTAATTGGATCAAAGAGGGGTCAGAAAGTGATGGCAGAAGAAGCTTCAATGGAAGGTGATGAAGATTTTTGGAAGGTTGAGGAAGAAAGGGTGTTGATGGAAGGTGACAAAGTGAAGGGTTTGCCGGGAGAACCAGAAGGTGTGGATTTTGATCAATATGGTGGCTATGTAACTGTGAATGCCAAAGCAGGGAGACGATTGTTCTACTACTTTGTAGAGTCACCTCACAATGCTTCCAACAAGCCCCTTGTTCTATGGCTCAATGGAGGGCCTGGCTGCTCTTCCCTTGGATATGGAGCCATGCAAGAATTGGGACCTTTTAGAGTCAACAGTGATGAAAGAACACTTCGCAGAAATGAATATGCATGGAACAATGTGGCAAATGTTATTTTCCTAGAATCTCCAGCAGGAGTTGGATTTTCGTATTCAAACACTTCTTCTGACTACTCTAAAACTGGAGACAAGAGCACAGCCATGGACTCATACACTTTTCTTGTAAACTGGCTCCACAGATTTCCACACTACAAATCTCGAGACCTGTTCATCACTGGAGAAAGCTATGCTGGACATTATGTTCCTCAGCTAGCTCACACTATTCTCACAAAGAATAAGCTTACAAATCACACAGTCATTAACCTCAAAGGGGTTGCGATTGGGAATGGTTGGATAGATGATAATATGTGTGAAAAGGGAATGTATGATTATTTCTGGACACATGCTTTGAACTCTGATGAAACCCATGAAGGCATTCTGAGGCATTGTGACTTTGAGAATGGTAACTTAACAGATGAATGCAACAAATATCAAACAAGAGGGGATGATGAGATTGGAGTGATTGACATTTATGACATATATGCTCCCCCTTGTGATTCTGCAACAAAAGCTGCCACTCACTCTGACAGCAATTTCGACCCTTGTTCTGACGAATATACCAAATCCTACTTAAATCTCCCCCAAGTACAAGAGGCTCTTCATGCTAAAACTTCAGAATGGTTTCCTTGCAGCGGGGTGGGATGGACAGATAGCCCAACAACAGTTCTACCCACTATAAATCGGTTAATATCAAGTGGCATAAGAACATGGATATATAGTGGTGATACAGATGGGCGTGTTCCCATAACATCATCTAGGTATTCAGTAAATGCATTGAAGCTTCCAGTCGAGACAGCATGGCGTCCATGGTATTCTGGAAATGAGGTTGGAGGATACTTGATTGGGTACAAAGGGCTCACCCTCATCACTGTAAGAGGAGCTGGGCACATGGTTCCAAGTTACCAACCAAAGCGAGCGTTAACCATGATCTCATTTTTTCTTCAGGGAGAACTTCCTCCCCAATTAAACTCTTAG 1455 0.4282 MSPMLSMNILLWFMVLSWWHFGISCEANKQGEYLHKLIGSKRGQKVMAEEASMEGDEDFWKVEEERVLMEGDKVKGLPGEPEGVDFDQYGGYVTVNAKAGRRLFYYFVESPHNASNKPLVLWLNGGPGCSSLGYGAMQELGPFRVNSDERTLRRNEYAWNNVANVIFLESPAGVGFSYSNTSSDYSKTGDKSTAMDSYTFLVNWLHRFPHYKSRDLFITGESYAGHYVPQLAHTILTKNKLTNHTVINLKGVAIGNGWIDDNMCEKGMYDYFWTHALNSDETHEGILRHCDFENGNLTDECNKYQTRGDDEIGVIDIYDIYAPPCDSATKAATHSDSNFDPCSDEYTKSYLNLPQVQEALHAKTSEWFPCSGVGWTDSPTTVLPTINRLISSGIRTWIYSGDTDGRVPITSSRYSVNALKLPVETAWRPWYSGNEVGGYLIGYKGLTLITVRGAGHMVPSYQPKRALTMISFFLQGELPPQLNS* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00905 484 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 73 463 IPR001563 GO:0004185|GO:0006508
Lapu8g00905 484 ProSitePatterns Serine carboxypeptidases, serine active site. 218 225 IPR018202 GO:0004185
Lapu8g00905 484 SUPERFAMILY alpha/beta-Hydrolases 74 477 IPR029058 -
Lapu8g00905 484 Gene3D alpha/beta hydrolase 69 327 IPR029058 -
Lapu8g00905 484 FunFam Carboxypeptidase 68 327 - -
Lapu8g00905 484 Pfam Serine carboxypeptidase 78 475 IPR001563 GO:0004185|GO:0006508
Lapu8g00905 484 Gene3D - 342 373 - -
Lapu8g00905 484 Gene3D - 382 476 - -
Lapu8g00905 484 PRINTS Carboxypeptidase C serine protease (S10) family signature 155 167 IPR001563 GO:0004185|GO:0006508
Lapu8g00905 484 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 178 IPR001563 GO:0004185|GO:0006508
Lapu8g00905 484 PRINTS Carboxypeptidase C serine protease (S10) family signature 446 459 IPR001563 GO:0004185|GO:0006508
Lapu8g00905 484 PRINTS Carboxypeptidase C serine protease (S10) family signature 204 229 IPR001563 GO:0004185|GO:0006508
Lapu8g00905 484 ProSitePatterns Serine carboxypeptidases, histidine active site. 446 463 IPR033124 GO:0004185
Lapu8g00905 484 FunFam Carboxypeptidase 382 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00905 Lapu-Chr8 27192868 27198285 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00905 347 477 Calmodulin-binding Proteins AT2G22960 29.412 4.63e-14 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00905 K16297 - gmx:100818983 835.099
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00905 8 27192868 27198285 Lapu8g00905 8 27192868 27198285 ECH