Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00865 ATGGAAGACCAAGTGCACGATGCACTACCCCCCGGTTACCGGTTCTACCCGTCGGAAGAGGTTCTCCTCCGCTATTACTTAACCAAGAAGAACGAGAACCGGGAGGGGGGGTTCAACGGTTCTGATTTGATCAAGGAACTGAAACTGTACGATCACGACCCCTTCGAATTACCGGACGCTGCGTGCTTTCCGTACGGTTACCGAGGGATGAAGAAGCATTGGTTCTGTTACACTGTTAAAGAGACCAAACGCGGAAGCAGAAAGGTCAAAAGCGGGTTCTGGCTCCGGAAGGGAAGGGTTCGGGATATCCGCGATAACGGTGGGATTGGGAACGCTGTTTTGGGCACAAGGTCGCGTTTCGTTTTCTACGTCGGCAATTCGCTGAAAAACGCTACCAGAACGGATTGGATTTTGTACGAGTACGCATTGGTTGACCAAATTCTGGCTTCGTTCGTGCTTTGTCGTGTTGTGAATAAGCCTCATCATAAGAATAGTCCGTCGGAAATTGGTCGCAGTTGTTGTGCTGAAGAGAGTGCCGCCGTGGCGGTGCGTCACATTGGTGTTCAGCATGATGGATGTGTGGGAGGTCATGTTGTTGAAGTTAAGGTGCGTGATGATGGCTTTGTTAATAGAGAGATTGAGGCTGCTGAGAATCCAATTAGGTGTGGTGGTGAACATAATCATGCTGCACCTGTTTCAATTGCTCAGGGAAGTCAGCCGGTTCAGGAAAGGCTTTCTGGACTTCCCTGTGGCAGTGCATTGTTCATTGAAGCTGTGACATGTCAGCAACATATGCTTTCCATTCTAGAGGAGGATTTCATAGAATTGAATGATATTGCATAA 843 0.4875 MEDQVHDALPPGYRFYPSEEVLLRYYLTKKNENREGGFNGSDLIKELKLYDHDPFELPDAACFPYGYRGMKKHWFCYTVKETKRGSRKVKSGFWLRKGRVRDIRDNGGIGNAVLGTRSRFVFYVGNSLKNATRTDWILYEYALVDQILASFVLCRVVNKPHHKNSPSEIGRSCCAEESAAVAVRHIGVQHDGCVGGHVVEVKVRDDGFVNREIEAAENPIRCGGEHNHAAPVSIAQGSQPVQERLSGLPCGSALFIEAVTCQQHMLSILEEDFIELNDIA* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00865 280 Gene3D NAC domain 18 164 IPR036093 GO:0003677|GO:0006355
Lapu8g00865 280 ProSiteProfiles NAC domain profile. 9 159 IPR003441 GO:0003677|GO:0006355
Lapu8g00865 280 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 9 168 - -
Lapu8g00865 280 Pfam No apical meristem (NAM) protein 10 143 IPR003441 GO:0003677|GO:0006355
Lapu8g00865 280 SUPERFAMILY NAC domain 8 159 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00865 Lapu-Chr8 26861232 26864979 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00865 9 186 NAC Transcription Factor Family AT1G32510 32.812 1.58e-24 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lapu8g00865 NAM 6.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00865 - - gmx:100785871 431.795