Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00851 ATGCCTCATCACTTCCCAAAACCCCTTCTAGATTCCCTATACTGCTTGGAAGATCACATTCATTGGGAAGAAGAAAAACAAAGAGAAGAAGAACATGAATACAATAGCACCGCAACAAAACCAAACTTCCCCGATGTGGTCCTTTCAGAACAAGACCTCTTCTGGGACACCGAGGAGCTATCTTCTCTTCTCGCCAAAGAAAACCTTAACGACCTTTCCCTCTCTCTCCCAAACAACCCTTCTCTGGCTTCTTCTCGCCGAGAAGCTGTGGACTGGATTCTCAAAGTGAATGTTCACCACTCCTTCTCTACCCTCACTGCAGTTCTCGCAGTTAACTACCTCGACAGGTTCCTCTTCAGCTTCAGATTCCAGAACGACAAACCATGGCTCACGCAACTCGTTGCAGTGGCGTGCCTCTCTCTTGCAGCTAAAGTTGAAGAGACCCACGTGCCCCTCTTCGTGGACCTCCAAGTGGGGCAGAGTAAATACCTTTTTGAAGCGAAAACGGTTAAGAGAATGGAAATCTTGATCCTTTCCAAGCTCGGATGGAAGATGAACCCAGTGACACCTCTCTCTTTTCTTGATTACATCACCAGGAAACTTGGCTTAAAGGGCCATCTCTGCTTGGAGTTTCTCAGAAGGTGTGAATCCGTTCTTCTCTCTGTCTTTGCAGACTCAAGATTCATGAGCTATCTTCCTTCTGTGTTGGCAACCGCTACGATGATGCGCGTGGTGAGTGTTGTGGAGCCTGGTTTGGGAGAGGAATACCAAGATCAGCTCCTGGGTATTCTCGGAATCGACAAGGAGAAGGTGAAGGAATGCTACAAGGTGGTAATGGAAGTAGTGTCAGAGAAGAATGAAGAGGGTAAACGAGGGAGTTTGAAGAAACGGAAGTTTGAGAGCGTTCAGTGTAGCTCAAACGACTTGATGGAAGGGTCGTTTAGCTGCGATAGTTCGTGTGATTCTTGGGAGTTAGGTGCATCTTCGAAGAAAAGTAGGAGCCAAGATCAGCTTCTACTGAACCATTCAAACTCAGATTTTCTCACCATTCCTCGCTAG 1059 0.4703 MPHHFPKPLLDSLYCLEDHIHWEEEKQREEEHEYNSTATKPNFPDVVLSEQDLFWDTEELSSLLAKENLNDLSLSLPNNPSLASSRREAVDWILKVNVHHSFSTLTAVLAVNYLDRFLFSFRFQNDKPWLTQLVAVACLSLAAKVEETHVPLFVDLQVGQSKYLFEAKTVKRMEILILSKLGWKMNPVTPLSFLDYITRKLGLKGHLCLEFLRRCESVLLSVFADSRFMSYLPSVLATATMMRVVSVVEPGLGEEYQDQLLGILGIDKEKVKECYKVVMEVVSEKNEEGKRGSLKKRKFESVQCSSNDLMEGSFSCDSSCDSWELGASSKKSRSQDQLLLNHSNSDFLTIPR* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00851 352 ProSitePatterns Cyclins signature. 86 117 IPR006671 -
Lapu8g00851 352 CDD CYCLIN_AtCycD-like_rpt2 188 276 - -
Lapu8g00851 352 FunFam CYCLIN D32 187 276 - -
Lapu8g00851 352 Gene3D - 187 276 - -
Lapu8g00851 352 Pfam Cyclin, C-terminal domain 188 291 IPR004367 -
Lapu8g00851 352 SUPERFAMILY Cyclin-like 189 284 IPR036915 -
Lapu8g00851 352 FunFam D6-type cyclin 70 186 - -
Lapu8g00851 352 SUPERFAMILY Cyclin-like 57 186 IPR036915 -
Lapu8g00851 352 Gene3D - 83 186 - -
Lapu8g00851 352 Pfam Cyclin, N-terminal domain 78 186 IPR006671 -
Lapu8g00851 352 CDD CYCLIN_AtCycD-like_rpt1 86 183 - -
Lapu8g00851 352 SMART Cyclin_C_2 188 308 IPR004367 -
Lapu8g00851 352 SMART cyclin_7 91 179 IPR013763 -
Lapu8g00851 352 SMART cyclin_7 192 280 IPR013763 -
Lapu8g00851 352 PANTHER CYCLINS 63 286 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00851 Lapu-Chr8 26683215 26685121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00851 9 298 Core Cell Cycle Gene Families AT4G34160 52.577 8.04e-96 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00851 K14505 - gmx:100804102 508.834