Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00833 ATGAGTTGCAACGGTTGTCGAGTGCTGCGAAAAGGATGCAGTGAGACATGTCCTTTGAGGTCGTGCCTGCAGTGGATCGAATCTGCTGAATCGCAACGACACGCCACTCTCTTCCTCGCTAACTTCTTTGGTCGCACCGACTTAATCTCCTTCATTGCTTCTGTTCCCCAAACCAAAAGACCTGCATTGTTTCAGTCTCTGCTATTTGAAGGGTGCGGACGAACGGTAAATCCGGTGAACGGTGCGGTGGGACTTCTGTTGAGCGGAAACTGGCACGTGTGTGAGGCGGCAGTGGAGACGGTGCTCGCGGGAGGCGTTCTTCGAGCGTTGCCGGAGACAGTCGCCGGAGTTTCCAATGCTACGCGCCATCATCTCCGGCCAATAACATTGAAGCATGATGCAAGAGAGATGAATGAGAGCTCATCAAGTTTGATGAACAGAACACAGGAATCGGAAACGCAGCGTTACGGTGGTCACAAGAAAAATCAGATCTTAAATTTGTTCCTGTAA 510 0.5098 MSCNGCRVLRKGCSETCPLRSCLQWIESAESQRHATLFLANFFGRTDLISFIASVPQTKRPALFQSLLFEGCGRTVNPVNGAVGLLLSGNWHVCEAAVETVLAGGVLRALPETVAGVSNATRHHLRPITLKHDAREMNESSSSLMNRTQESETQRYGGHKKNQILNLFL* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00833 169 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 143 - -
Lapu8g00833 169 MobiDBLite consensus disorder prediction 137 157 - -
Lapu8g00833 169 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Lapu8g00833 169 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00833 Lapu-Chr8 26487909 26489509 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00833 1 149 AS2 family AT4G37540 59.639 8.08e-62 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lapu8g00833 LOB 4e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00833 - - gmx:100796966 282.722