Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00810 ATGCAGTCGAACCGGGAGTCAGCCCGGCGGTCGCGCTGGAGAAAGAAGCGGCATGTAGAGAACCTCACGAACCAAGCGAACCGGTTCAGAATGGAAAACCGAGAATTAAAAAACCGGTTATGCATAACCATGCACCAGAATCTTCTTCTCTCCGTGGAGAATGAACGTCTTAGATCCGAATCCATGACCCTTATGGCCACACTCTCAAATCTTTATCAAATTTTAGGCACCATGATTTCACAACACTAG 249 0.4739 MQSNRESARRSRWRKKRHVENLTNQANRFRMENRELKNRLCITMHQNLLLSVENERLRSESMTLMATLSNLYQILGTMISQH* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00810 82 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 78 - -
Lapu8g00810 82 SMART brlzneu 1 56 IPR004827 GO:0003700|GO:0006355
Lapu8g00810 82 FunFam BZIP transcription factor 1 46 - -
Lapu8g00810 82 Coils Coil 19 39 - -
Lapu8g00810 82 Gene3D - 1 48 - -
Lapu8g00810 82 SUPERFAMILY Leucine zipper domain 1 48 IPR046347 GO:0003700|GO:0006355
Lapu8g00810 82 Pfam bZIP transcription factor 1 40 IPR004827 GO:0003700|GO:0006355
Lapu8g00810 82 CDD bZIP_plant_GBF1 1 46 IPR045314 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00810 Lapu-Chr8 26267823 26268194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00810 1 75 bZIP Transcription Factor Family AT2G22850 49.333 6.09e-16 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lapu8g00810 bZIP_1 7.4e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00810 - - var:108337908 150.984