Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00778 ATGGGTATCTGCATATCAGTTTCAGAAGAAGATGATGATGAGAATGTGACAATCTTTGAAGGAAAGAAGAAGGTCCCAAATGAGAGTCAGAGACTTTTCTCTGTTTATTCCAAACAGGGTACCAAAGGACTCAACCAAGATGCTGCCTTTATTCACCAGGGTTATGGAATGGAAGATGGAATTTTTTGTGGTGTTTATGATGGTCATGGGGGGAATGGACACAGAGTGAGCAAAATTGTAAGCAGTCGATTATCTTCCCTCATACTGGACCAAAAGAATGTTCTTGAAAAACTTGATGCTATAGAAAATGGTAATCATAACACCACCACAAAAAACCAAGTTGACACAATGAAAGAGGACTCAGCTGCAAACAGCTTTCAGCAATGGAAAGAAGCAATTATTAGTGCTTTCAAGGTGATGGAGAAAGAGATTAAGCTTCAACATAATCTAGATTGTTCTAACAGTGGAACCACTGCTGTGGTTATCATAAAACAGGATGAAGGTCTTGTCATAGCTAATCTGGGTGACTCAAGAGCAGTGATGGGAACAATATGTGATGAAAAACTCATAGCCACTCAATTGACCACGGATTTGAAGCCTGATTTACCTCGAGAAGCAGACAGAATAAGAAGGTGCAATGGTTGTGTGTATGGATTGAAGGAAGAACCAGAAATCCAGAGAGTGTGGATGCCCAACAATGATAACTCCCCTGGCCTAGCCATGTCTCGATCTTTTGGAGATTTCTTGCTCAAGGATTATGGTGTTATTGCTATCCCAGATATTTCTTATCAACCTCTAACATCAAGTTACCAATTTATTGTTCTTGCTAGTGATGGGGTGTGGGATGTATTAAGCAACAGTGAGGTTGCATCAATTGTGTGGAGTGCTGAGAGCGAAGAGATTGCAGCAAGAGCAGTAGTGGAAGCAGCCACAGCTGCATGGAAAGACAAGTTTCCTTCCTACATGGCAGATGACTGCACTGTGGTTTGCCTCTTCCTGCACAAGAAACCACAACTTCAGCCATTTCAAAACTAA 1035 0.4135 MGICISVSEEDDDENVTIFEGKKKVPNESQRLFSVYSKQGTKGLNQDAAFIHQGYGMEDGIFCGVYDGHGGNGHRVSKIVSSRLSSLILDQKNVLEKLDAIENGNHNTTTKNQVDTMKEDSAANSFQQWKEAIISAFKVMEKEIKLQHNLDCSNSGTTAVVIIKQDEGLVIANLGDSRAVMGTICDEKLIATQLTTDLKPDLPREADRIRRCNGCVYGLKEEPEIQRVWMPNNDNSPGLAMSRSFGDFLLKDYGVIAIPDISYQPLTSSYQFIVLASDGVWDVLSNSEVASIVWSAESEEIAARAVVEAATAAWKDKFPSYMADDCTVVCLFLHKKPQLQPFQN* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00778 344 PANTHER PROTEIN PHOSPHATASE 33 331 IPR015655 GO:0004722|GO:0006470
Lapu8g00778 344 SUPERFAMILY PP2C-like 31 335 IPR036457 -
Lapu8g00778 344 SMART PP2C_4 22 331 IPR001932 -
Lapu8g00778 344 Gene3D - 15 336 IPR036457 -
Lapu8g00778 344 Pfam Protein phosphatase 2C 62 311 IPR001932 -
Lapu8g00778 344 CDD PP2Cc 31 333 IPR001932 -
Lapu8g00778 344 ProSiteProfiles PPM-type phosphatase domain profile. 32 333 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00778 Lapu-Chr8 25832732 25835918 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00778 25 334 PP2C-type Phosphatase Gene Family AT1G79630 45.322 9.83e-95 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00778 - - gmx:100815312 535.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00778 8 25832732 25835918 Lapu8g00778 8 25832732 25835918 ECH