Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00774 ATGGAGAATAATATGTACAGTGCTTCACTGGACATTGCTGGCAGAAATTCTGCTGTCATAGAAGAAATTGCACAACATTTAGCGCCAAAGCCACTGACTCAATGCTACTCATTTGACCTCAATAACCAAAACCACATTATAAATGGAATTCCTGTACTTGGTGCAGATCAAGGTGAACCTGCAGGTGATGTCCATGTTGATGGTTGCTTCATAAACCCTGCTAGAATTGCTGATTCCAATTCATTTGTCACAATACAAGGAAAGACTATTGTAGGAGATGCCTCAAATCCCATTAACAACAGTGCCACTCAAGAGCATTTAGCTGGAGGAAGGCCAATTGCTTCTGCTGCTTCACTTGCTGATAGAATAGGCCTTCAAGAAAATCTGCAGAGTTCAGCAGCTTTGTCTCATTCAATGTGTTCATTGGAGGCATTGGAACCATACATCTTCAATAGTTGGCAAGATACATCAAACCCTTTGGCTGAAACTTTTGGTGATCATGCCTATGATGAACTATCAGGTATTCATAAGTGGAATGTGAACAAGTTTCTGAAAGCTCCAGAGGCCAATGGCTCTGAGATCCTGGCTTATTCTTCCCTGGGAAACCTGGTTCAAAATGGATGGACATCATCAAATGTTGCAAGCTTGGCCAACTATGCATATAATTCCTCTAATTGTAGTAATGAGCTATCACTAAGTCTTGCAAGATCTCCTCCAACTACAGGTCAGCGCTCAGAGATGAGCTGCTCCAACGCATCTCTTAGCATGAGTGGAACAAGTTCAGGCTTGGAGCAACCTTCCTGCAGCAGTAAGGAACTGTCTGTGAGATTGGGTTCTAACAAACATGTCCAGTTTTCACCAGCAATATTGGGGTCCAGATATCTTGCTGGAGTTCAAGAGATATTTGCTCAAATTGCTACATATTCATTTGAAAATGTAGAGCTGATAAATTACTCAGCTTCTGGTTTTAGAACAGCTGGAAATAAGTCAGCTTCAGCTTTCACACCAAAGAGAAGGGTAGCGAATAATCATAATGCAAATTCCATGTATGGATCACATGTAGAAGAATCTCCATTGGAAAGACATGCAGCGGACTCAAATAAATCTCAACTTCTCATGCTTCTACAGCTGGTGGACAATGGATATAGTCAGTGTTTGGATGAGGTTCATACTGTGGCATCTGCGTTCCATGCTGCTACTGAGCTGGATCCACACATGCATGCACATTTTGCACTTCAAACCATTTCTCTCTTATACAAGGACTTGAGAGAGAGGATTAGCAATTGTATTCTTGCCATGGGACCAGATTTTAACAGCTTGTGTTCAGAAGAGGAGAAGGAATGGTCCCTTGAAACTTCATTCATTCAAAAGCAATGGGCTCTGCAGCAGATGAAAAAAAAAGATCAGTTATGGAGACCCCAAAGGGGCTTGCCAGAGAGATCTGTCTCAGTTCTACGCGCTTGGATGTTTCAGAATTTCCTCCATCCGTATCCTAAAGATGCAGAGAAGCATTTACTGGCAGTAAAAAGTGGGTTGACAAGAAGCCAGGTATCGAATTGGTTTATCAATGCACGTGTTCGGCTATGGAAGCCTATGATTGAAGAAATGTACGCTGAAATGAGTAGAAGAAAAGCTTGTAGAAATGAAGAAGGATTGGAGAGCACTCACAGAAGCAGGATAAGCATGAATAGTCAAATGCTGAATATCAATTGA 1713 0.4174 MENNMYSASLDIAGRNSAVIEEIAQHLAPKPLTQCYSFDLNNQNHIINGIPVLGADQGEPAGDVHVDGCFINPARIADSNSFVTIQGKTIVGDASNPINNSATQEHLAGGRPIASAASLADRIGLQENLQSSAALSHSMCSLEALEPYIFNSWQDTSNPLAETFGDHAYDELSGIHKWNVNKFLKAPEANGSEILAYSSLGNLVQNGWTSSNVASLANYAYNSSNCSNELSLSLARSPPTTGQRSEMSCSNASLSMSGTSSGLEQPSCSSKELSVRLGSNKHVQFSPAILGSRYLAGVQEIFAQIATYSFENVELINYSASGFRTAGNKSASAFTPKRRVANNHNANSMYGSHVEESPLERHAADSNKSQLLMLLQLVDNGYSQCLDEVHTVASAFHAATELDPHMHAHFALQTISLLYKDLRERISNCILAMGPDFNSLCSEEEKEWSLETSFIQKQWALQQMKKKDQLWRPQRGLPERSVSVLRAWMFQNFLHPYPKDAEKHLLAVKSGLTRSQVSNWFINARVRLWKPMIEEMYAEMSRRKACRNEEGLESTHRSRISMNSQMLNIN* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00774 570 CDD homeodomain 471 532 IPR001356 GO:0003677
Lapu8g00774 570 Pfam Homeobox KN domain 488 527 IPR008422 GO:0003677|GO:0006355
Lapu8g00774 570 SUPERFAMILY Homeodomain-like 473 540 IPR009057 -
Lapu8g00774 570 ProSiteProfiles 'Homeobox' domain profile. 468 531 IPR001356 GO:0003677
Lapu8g00774 570 SMART prehox3 283 428 IPR006563 -
Lapu8g00774 570 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 237 553 - -
Lapu8g00774 570 Gene3D - 474 553 - -
Lapu8g00774 570 Pfam Associated with HOX 289 427 IPR006563 -
Lapu8g00774 570 SMART HOX_1 471 535 IPR001356 GO:0003677
Lapu8g00774 570 MobiDBLite consensus disorder prediction 234 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00774 Lapu-Chr8 25797928 25802107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00774 228 544 Homeobox Transcription Factor Family AT4G32980 53.067 9.17e-100 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Lapu8g00774 POX 2.9e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00774 - - gmx:100812648 940.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00774 8 25797928 25802107 Lapu8g00774 8 25797928 25802107 ECH
Lapu8g00774 8 25797928 25802107 Lapu9g02039 9 35161938 35165451 PCT