Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00767 ATGCCAAAGATGAAGCACCTTCTCAGAAAGCTTCACATCGGGGGTGGCGCTGCCACCATCAATCACAATAACAATCACAATCACAACGCATTGTCTTCGCACGCGCATCACGCTCCCTCCACTTCCGCGCTCTCTTCGCCAACAGTCGTTTCGGATCCGACGCCGACTGCGAGCCCCGTCGTGGAGGCCCAGAACGACGTCGTAGAATTCAACTTACTGCAGGAGGAGGAGTTTCAGATGCAACTAGCGCTCGCAATCAGCGCCTCTGATTCCGATCGCCGCGACACCGCGGAATCGGCGCAGATCGACGCCGCGAAACAGATCAGCCTCGGTTACTCTGCTTCGTTCACTGACACTCAAGCCCTAGTTCAGTTCCAATCCCTTCGTTATTGGAACTACAATGTGATTGGTTATGATGAGAAAGTGATGGATGGGTTTTATGATGTGTATGGGGTTACCTCGAATTTGGTTGATAGAGGGAAGATGCCATTGTTGGTGGATCTGCAGACGGCTCCTGTCTCGGGAGATGTTGATTGTGAGGTGATTTTGGTGAACCATGTGGTAGATCTTGAGCTCAATCAGCTTGAGAGGAAGGCGTGTAGTTTGGTTGAGGAGTGTTGTGTTTCTGAACTGGGACTGATTTTGAGTGGCTTGCTTCAGAAGCTCGCGGATGTTGTTGTTAATAGAATGGGTGGACCTGTTATTAATGCTGAGAAACTTACTAAGAGGTGGGCTATGAGGAGTCGTGAGTTATGGGATTCTATGCAAACCATTGTTCTTCCCCTTGGCTGTCTTGATGTTGGACTTTCACGTCACCGAGCCCTACTTTTTAAGGTACTTGCTGATAGGATAAACGTTCCCTGCATGCTAGTAAAAGGGAGCTATTATACAGGAACTGACGATGGGGCTGTGAATTTGATTAAAGCTGATGATGGAAGTGAATACATTATTGATTTGATGGGTGCCCCTGGAACTCTTATTCCTGCTGAGGTACCCAGCAGTCAGCTTGAAAGCAACAGTTTTGCTGTTAGGGGTTGTGCAGAGATTATTGGATTACCAGACAAGACAAGTTCAATGGTAGATGATGGAACTGTTGTGCCAGGAGTCTTTTCTGATTGTGGTAGAATTTCATCAGTGAGGAGGGTCCAGACAGAAGAATTATCAGTTATGGGCAGTCAAACAAAGCCAGATGAAATTAATGATATTAAAGTAAATGAGACAAGGAGATTTGAATATACAGAAGCTTATGAATGCTCATCACATGCAGAACCATCACCTGCAGAGAATATGCGTGTAAAAAATGTCTCCAAGTATGTTCTCAGTGCAGCAAAGGACCCAGAATTTGCCCAAAAACTGCATAATGTTTTACTAGAGAGCGGTGCCTTACCCCCTCCTGATCTTTTTTCAGATATAAATCCCCAAGATAGGGGTGTAGATAAAGTAAATGAAAACAATGTTGATTCTGACACAAATAGATTATTATTATTAAGGTATGAAAAGTCTCTCATACCCTCACATGGGTTGGGCTCTGCCAATGATACTAGGTTATGTCAATCAGCTGACTGGTTATCCGAACAACAAAAAGAATTGCATACAGATGTTGAATTTTACAATTCTTCACAGAGCGATAATACTAGGAATGGGTTTTTAAATGTTTCTGATAAAGATATTGACATAGAGAAATCTAACGCAATGAATGTTGTTTTGGCTTCTATACACTCACATAATAAGATATGTAAAGAAAAGTGTACTGGATCTTTCTTGCCCAAGGCAGCTCTTTCCTGTAAAATGCATAATGGGGTTGACTGTTTCTGTGAAGATGATGAAAATGGTTATAGAAACAATGTCGGATCTTCTTTTAACAACAGTGGATTGGGAAAAGATTCAGCTGTTCAAAGAAATGAAATGGAGGTTAATGGAGATTGTTATGATGGTAGAAACAAGGAAGTTAACCCAGTGCTTGGTGAAGGCTCAGAATGGGAAATTCAATGGGAGGATCTTGATATTGGTGAGCGTATTGGTATTGGTTCGTATGGTGAAGTTTATCGTGCTGATTGCAATGGCACTGAAGTTGCTGTAAAGAAGTTTCTAGACCAAGATTTCTCTGGCGATGCACTTGCTCAGTTCAAATCTGAAGTTGAGATCATGCTAAGGCTCCGACATCCTAATGTTGTGCTCTTCATGGGAGCAATTACTCGCCCCCCACATTTCTCTATCTTAACAGAATTTCTTCCAAAAGGCAGTTTATATAGGCTATTGCATCGTCCCAATCTCCGGCTTGATGAGAAGAAACGGTTGCGCATGGCTCTAGATGTGGCTAAGGGAATGAATTACTTGCACACGAGCCATCCTCCCATTGTACACCGAGATTTGAAGTCTCCAAATCTTCTTGTTGACAGGCATTGGATTGTTAAGGTTTGTGATTTTGGTCTGTCACGAATGAAGCACCATACATTTTTGTCGTCAAAGTCTTGTGCTGGAACGCCTGAGTGGATGGCACCAGAAGTCTTAAGAAATGAGCCAGCCAACGAGAAGTGTGATGTGTATAGTTTTGGTGTGATATTGTGGGAGTTGATTACCACAAGAATTCCCTGGAAAGGTTTGAACCCAATGCAGGTTGTTGGAGCTGTTGGATTCCAAAACAAACGGCTTGAAATTCCAGAAGATGTCAATCCAGTGGTAGCACAGATTATACGTGATTGCTGGCAAACGGAGCCTCACTTGCGGCCATCTTTCTCACAGCTGATGTCTCGTCTTTACCGTCTTCAACATATGGTTGTCCCAAAAACGAGTTCAACACATTAA 2805 0.4335 MPKMKHLLRKLHIGGGAATINHNNNHNHNALSSHAHHAPSTSALSSPTVVSDPTPTASPVVEAQNDVVEFNLLQEEEFQMQLALAISASDSDRRDTAESAQIDAAKQISLGYSASFTDTQALVQFQSLRYWNYNVIGYDEKVMDGFYDVYGVTSNLVDRGKMPLLVDLQTAPVSGDVDCEVILVNHVVDLELNQLERKACSLVEECCVSELGLILSGLLQKLADVVVNRMGGPVINAEKLTKRWAMRSRELWDSMQTIVLPLGCLDVGLSRHRALLFKVLADRINVPCMLVKGSYYTGTDDGAVNLIKADDGSEYIIDLMGAPGTLIPAEVPSSQLESNSFAVRGCAEIIGLPDKTSSMVDDGTVVPGVFSDCGRISSVRRVQTEELSVMGSQTKPDEINDIKVNETRRFEYTEAYECSSHAEPSPAENMRVKNVSKYVLSAAKDPEFAQKLHNVLLESGALPPPDLFSDINPQDRGVDKVNENNVDSDTNRLLLLRYEKSLIPSHGLGSANDTRLCQSADWLSEQQKELHTDVEFYNSSQSDNTRNGFLNVSDKDIDIEKSNAMNVVLASIHSHNKICKEKCTGSFLPKAALSCKMHNGVDCFCEDDENGYRNNVGSSFNNSGLGKDSAVQRNEMEVNGDCYDGRNKEVNPVLGEGSEWEIQWEDLDIGERIGIGSYGEVYRADCNGTEVAVKKFLDQDFSGDALAQFKSEVEIMLRLRHPNVVLFMGAITRPPHFSILTEFLPKGSLYRLLHRPNLRLDEKKRLRMALDVAKGMNYLHTSHPPIVHRDLKSPNLLVDRHWIVKVCDFGLSRMKHHTFLSSKSCAGTPEWMAPEVLRNEPANEKCDVYSFGVILWELITTRIPWKGLNPMQVVGAVGFQNKRLEIPEDVNPVVAQIIRDCWQTEPHLRPSFSQLMSRLYRLQHMVVPKTSSTH* 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00767 934 ProSiteProfiles Protein kinase domain profile. 667 927 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00767 934 PRINTS Tyrosine kinase catalytic domain signature 846 868 IPR001245 GO:0004672|GO:0006468
Lapu8g00767 934 PRINTS Tyrosine kinase catalytic domain signature 890 912 IPR001245 GO:0004672|GO:0006468
Lapu8g00767 934 PRINTS Tyrosine kinase catalytic domain signature 741 754 IPR001245 GO:0004672|GO:0006468
Lapu8g00767 934 PRINTS Tyrosine kinase catalytic domain signature 827 837 IPR001245 GO:0004672|GO:0006468
Lapu8g00767 934 PRINTS Tyrosine kinase catalytic domain signature 780 798 IPR001245 GO:0004672|GO:0006468
Lapu8g00767 934 FunFam Serine/threonine-protein kinase CTR1 746 929 - -
Lapu8g00767 934 SMART serkin_6 667 926 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00767 934 CDD STKc_MAP3K-like 673 919 - -
Lapu8g00767 934 MobiDBLite consensus disorder prediction 22 58 - -
Lapu8g00767 934 ProSitePatterns Protein kinases ATP-binding region signature. 673 695 IPR017441 GO:0005524
Lapu8g00767 934 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 116 923 - -
Lapu8g00767 934 Pfam Ethylene-responsive protein kinase Le-CTR1 124 327 - -
Lapu8g00767 934 SUPERFAMILY Protein kinase-like (PK-like) 658 926 IPR011009 -
Lapu8g00767 934 ProSitePatterns Serine/Threonine protein kinases active-site signature. 786 798 IPR008271 GO:0004672|GO:0006468
Lapu8g00767 934 Pfam Protein tyrosine and serine/threonine kinase 668 919 IPR001245 GO:0004672|GO:0006468
Lapu8g00767 934 FunFam Serine/threonine-protein kinase isoform 1 658 745 - -
Lapu8g00767 934 Gene3D Transferase(Phosphotransferase) domain 1 746 931 - -
Lapu8g00767 934 Gene3D Phosphorylase Kinase; domain 1 660 744 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00767 Lapu-Chr8 25717428 25727894 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00767 594 933 MAP Kinase Kinase Kinase AT5G11850 69.890 7.01e-175 529
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Lapu8g00767 PK_Tyr_Ser-Thr 5.7e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00767 K04424 - gmx:100779137 1624.76