Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00763 ATGACTCCTTATTCTCTTCACCCACCACCTCCTTCCATACAGCCTCAAACCCAAATCTTCATTTCTCCTGATAATCAGGACTGCCCTACCCTTTTTAACATATTTGATCCAAGGAAAACCATAGAAATTGGAGGGTTCAGAGAAAATTATCCACAGGCAAGGATGGTATTGCATGATGGATCATCAAGCAATAATATCAATTCACCTGATCAGCCAGTTATGGTTGATTCAATTAGCAGCAGAAGTGAGGGTAATCTAGCCTTGTGCAAAATGGATGAAGAAGACAAAAAAAATGGTCACGGGTCTGGGAAATGGATGTCTTCAAAGATGAGGTTAATGAAAAAAATGATGAGAAGAAGTATGAGTCCTACCACTGACAGATTGAATCCACAAGGCCAAGAAAGCAGATACAGCCAAAGAAGCCCTCGTAACAACAGCAGTAGCACCACTAGGGTTTGTTCGGATTGTAACACAAGCACTACCCCACTTTGGAGGAGTGGCCCTAAGGGTCCTAAGTCGCTTTGCAATGCCTGCGGCATTAGACAGAGGAAGGCAAGAAGGGCAATGGCTGAAGCTTCAAATGATTTGGTCACTCCCATAAACTCAGTATGTGCAAGGACCAGAGTTCACAGCAAGGAAAAGAAGTCTCGTGCAAACCATTTTGCACAGTTCAAGAACAAGTACAAGTCCACCACCACCACTACTAGTACTCCTCCTGCAGGCTCGTCTGAGGGAGTGAGGAAGATTGAATATTTCAAAGACTTTGCCATAAGTTTAAGGAACAACTCTTCTTTCCACCAAGTGTTTCCACGGGATGAAGTAGCCGAGGCAGCAATGCTTCTGATGGAGTTGTCTTGTGGTTTTGTCCACTTATAA 876 0.4372 MTPYSLHPPPPSIQPQTQIFISPDNQDCPTLFNIFDPRKTIEIGGFRENYPQARMVLHDGSSSNNINSPDQPVMVDSISSRSEGNLALCKMDEEDKKNGHGSGKWMSSKMRLMKKMMRRSMSPTTDRLNPQGQESRYSQRSPRNNSSSTTRVCSDCNTSTTPLWRSGPKGPKSLCNACGIRQRKARRAMAEASNDLVTPINSVCARTRVHSKEKKSRANHFAQFKNKYKSTTTTTSTPPAGSSEGVRKIEYFKDFAISLRNNSSFHQVFPRDEVAEAAMLLMELSCGFVHL* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00763 291 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 147 187 - -
Lapu8g00763 291 CDD ZnF_GATA 152 189 IPR000679 GO:0006355|GO:0043565
Lapu8g00763 291 Gene3D - 147 232 IPR013088 GO:0006355|GO:0008270
Lapu8g00763 291 MobiDBLite consensus disorder prediction 118 170 - -
Lapu8g00763 291 PANTHER GATA TRANSCRIPTION FACTOR 22-RELATED 58 290 - -
Lapu8g00763 291 Pfam GATA zinc finger 153 186 IPR000679 GO:0006355|GO:0043565
Lapu8g00763 291 ProSitePatterns GATA-type zinc finger domain. 153 178 IPR000679 GO:0006355|GO:0043565
Lapu8g00763 291 SMART GATA_3 147 198 IPR000679 GO:0006355|GO:0043565
Lapu8g00763 291 MobiDBLite consensus disorder prediction 122 166 - -
Lapu8g00763 291 ProSiteProfiles GATA-type zinc finger domain profile. 147 183 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00763 Lapu-Chr8 25683826 25686131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00763 99 290 C2C2-Gata Transcription Factor Family AT4G26150 34.667 1.05e-29 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Lapu8g00763 GATA 2.6e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00763 - - vra:106764137 429.098