Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00746 ATGGAGGGAATTAGAGTGAAGGAGGAAGCAACAGTGACATGTGGTGGTGGTGGTTCTTCATCATCTTCGTCTTTAAGCTTTTCTCCTCAACCTATGGAAGGGTTGAACGATGTTGGTACCCCTCCATTTTTGACAAAGATCTATGACATGGTGGAAGATCCTTCTACAGACTCTATTGTGTCATGGAGCACTTCTTGCAATAGCTTTGTTGTGTGGGATTCTCACAAGTTTTCTAGTAACATTCTTCCTCGTTACTTCAAGCACAACAATTTCTCCAGCTTCATTCGGCAGCTCAACTCCTATGGGTTTAGGAAAGTGGATCCTGATAGATGGGAGTTTGCAAATGAAGGATTTTTGGCAGGACAAAGACACTTATTGAAGGCCATAAAGAGAAGAAGAAAAGTGTCACAGAGCATGCAAGAAAGAGGAGGTGGAGCATGTGTTGAAGTGGGGGAGTTTGGACTAGAAGGTGAGTTGGAGAGGTTGAAAAGAGATAGGAACATTTTGATGGCAGAAATTGTTAGGTTGAGGCATCAACAGCTGAACTCAAGAGATCAATTGAGTGCCATGGAGACCAGATTGCAAGCCACAGAGAAGAAACAGCAAAAGATGATGATATTCCTTGCCAAAGCACTAAAAAATCCATCTTTCATGCAACAATTAGTCCACAAGACTCCCCAAAGTAGAGAAATGTTGAATGTTGATGAAATTAATAGGAAAAGGAGACTAATTGCTAGCCAAAGTTTTGAAAACTTGCAACAAGATGACCCTGTAACATTGGTGGACTATCCAAGCCTTGATAAAGATTTGGCAACTATGGAGCCTAAGATGGACACTTTTTTCTCACCGGCTTTTGATGGTAATGAAATCAATGAGCCTGCATTAGATTCAGATATAACAGCTAGTCAGAGTGAATTTGGAGACACACTATTGGAGGACTTGCTCATCCAAGACTTGGTCACTGGGGATCCAAAGGATGAAGTTATCATTGGTGATTGTTCCCAAATTGATGTGCCAGTGGAGGATTTGGTAGCAAACCCTGATGATTGGAGTGAGCAATTTCAGGACCTTGTGGATCATATGGACTATTGA 1092 0.4167 MEGIRVKEEATVTCGGGGSSSSSSLSFSPQPMEGLNDVGTPPFLTKIYDMVEDPSTDSIVSWSTSCNSFVVWDSHKFSSNILPRYFKHNNFSSFIRQLNSYGFRKVDPDRWEFANEGFLAGQRHLLKAIKRRRKVSQSMQERGGGACVEVGEFGLEGELERLKRDRNILMAEIVRLRHQQLNSRDQLSAMETRLQATEKKQQKMMIFLAKALKNPSFMQQLVHKTPQSREMLNVDEINRKRRLIASQSFENLQQDDPVTLVDYPSLDKDLATMEPKMDTFFSPAFDGNEINEPALDSDITASQSEFGDTLLEDLLIQDLVTGDPKDEVIIGDCSQIDVPVEDLVANPDDWSEQFQDLVDHMDY* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00746 363 PRINTS Heat shock factor (HSF) domain signature 94 106 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lapu8g00746 363 PRINTS Heat shock factor (HSF) domain signature 81 93 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lapu8g00746 363 PRINTS Heat shock factor (HSF) domain signature 43 66 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lapu8g00746 363 ProSitePatterns HSF-type DNA-binding domain signature. 82 106 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lapu8g00746 363 Pfam HSF-type DNA-binding 43 132 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lapu8g00746 363 SUPERFAMILY "Winged helix" DNA-binding domain 40 132 IPR036390 -
Lapu8g00746 363 SMART hsfneu3 39 132 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lapu8g00746 363 FunFam Heat shock transcription factor 1 36 133 - -
Lapu8g00746 363 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 29 242 IPR027725 -
Lapu8g00746 363 Coils Coil 159 179 - -
Lapu8g00746 363 Gene3D - 36 133 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00746 Lapu-Chr8 25511654 25515582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00746 29 363 HSF AT2G26150 50.296 7.18e-112 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lapu8g00746 HSF_DNA-bind 2.1e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00746 K09419 - gmx:100778558 521.546