Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00724 ATGAGTTCGAGTTCAACAACGTACGATGACTCACAACCCCACGCGCCGCAAGAAATTGATTGGCAGATGCTCGACAAGTCCAAGTTCTTCTTCCTAGGAGCAGCCCTCTTCTCCGCCGTCTCCGCCGCCCTCTACCCTGCCGTCGTTTTGAAGACACGTCAGCAAGTGTCCGCCGCCGAAATCTCGTGCCGCCACATGTCGCGCTCCATCATGCGGTACGAGGGTCTCCGAGGTTTTTACCGAGGTTTCGGCACCTCCTTAATGGGAACAATCCCCGCACGTGCGCTTTACATGTCGGCGCTCGAAGTCACCAAGAGCAACGTCGCCACCGTCACCGTTCGCTTGGGGTTCTCCGATGCCTCTGCCACTGCAATCGCTAATGCTGCCGGAGGTGTGGCTTCTGCCATGGCAGCACAGTTGGTGTGGACCCCAGTTGATGTTGTGAGCCAGAGACTCATGGTACAAGGAAGTAAGAGAATGTGCTACAGGAATGGTTTTGATGCATTCAGAAAAATTCTGGGTGTGGACGGTCCAAGAGGGTTCTACAGGGGGTTCGGGGTTTCCATCGTAACCTACGCTCCCTCGAACGCCGTTTGGTGGGCTTCGTATTCGATGGTGCACAAGCTCATCTGGGGCAAGTTCGGTTCCAAGAACAAGGGTTTGAACATGGGAGGAGATTGGAGGGTGACGATGGTGGGGGTGCAAGGGTTAAGTGCAGTTATGGCAAGTGGGGTTTGTGCAGTTGTGACGATGCCACTTGACACGATAAAGACGAGGTTGCAGGTGTTGAACGCAGAGGAAGTGAGTGTCTCGAAGGTGGTAAGAGATTTGGTGAGGGAAGGAGGCATTTTGGCTTGTTACAGAGGCTTGGGACCAAGGTGGGCGTCCATGTCCATGTCTGCAGCCACCATGATTACTACCTATGACTTCTTGAAAAGTGTGTGCTGCAAAGAATGTTGA 960 0.5375 MSSSSTTYDDSQPHAPQEIDWQMLDKSKFFFLGAALFSAVSAALYPAVVLKTRQQVSAAEISCRHMSRSIMRYEGLRGFYRGFGTSLMGTIPARALYMSALEVTKSNVATVTVRLGFSDASATAIANAAGGVASAMAAQLVWTPVDVVSQRLMVQGSKRMCYRNGFDAFRKILGVDGPRGFYRGFGVSIVTYAPSNAVWWASYSMVHKLIWGKFGSKNKGLNMGGDWRVTMVGVQGLSAVMASGVCAVVTMPLDTIKTRLQVLNAEEVSVSKVVRDLVREGGILACYRGLGPRWASMSMSAATMITTYDFLKSVCCKEC* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00724 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 122 209 IPR018108 -
Lapu8g00724 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 25 107 IPR018108 -
Lapu8g00724 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 230 314 IPR018108 -
Lapu8g00724 319 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 14 317 - -
Lapu8g00724 319 Gene3D Mitochondrial carrier domain 29 318 IPR023395 -
Lapu8g00724 319 SUPERFAMILY Mitochondrial carrier 22 311 IPR023395 -
Lapu8g00724 319 Pfam Mitochondrial carrier protein 236 315 IPR018108 -
Lapu8g00724 319 Pfam Mitochondrial carrier protein 123 212 IPR018108 -
Lapu8g00724 319 Pfam Mitochondrial carrier protein 35 107 IPR018108 -
Lapu8g00724 319 PRINTS Mitochondrial carrier protein signature 80 98 IPR002067 GO:0055085
Lapu8g00724 319 PRINTS Mitochondrial carrier protein signature 131 153 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00724 Lapu-Chr8 25195682 25198212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00724 12 318 Chloroplast and Mitochondria Gene Families AT5G26200 64.308 9.66e-145 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00724 K15121 - gmx:100797365 481.485