LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu8g00719	ATGTTGGCAACCTTTGAAAATTTCCACTGCTTCAAAATTTTTCTTCTTCTGCTCATCCTCTTTATCCTTCCAATAAACATAGTTCAACCATTTTCCTTCAGCATAACTAACTTTAACGACACTGAAAGTGCAAGCCTCGTTGGATACGCAGGCGTAGCCAAGATTGAGAATGGAACTGCAGTGCTCAACCCGCTCATCAAGAATGGAGTTGGAAGAGCCATCTATGGCCATCCTCTACGCCTCAAAAACTCTTCTAACGGGCTTGTCACTGATTTTTCAACTCGCTTTTCATTCACTATCGACGTTACTTTAGGAACAACCTACGGTGATGGCTTTGCCTTCTACTTGGCACCCCTAGCGTACCAGATTCCGACCACCACTTCTGATGGTTCCCGTCTAGGCCTATACGATGACACCCAAAGTAATATCGTTGCTGTCGAATTTGACACTTATGTAAACGAGTTAGACCCACCAATGCAACACGTAGGGATCAACAATAACTCTGTGGCATCTCTCAATTATACCAAGTTTGATATTGAGAGCAACACAGGAAACATGGGGCATGCGTTGATAACTTACAATGCTTCTGCCAAACTCCTTGCCGTCTCCTGGTTCTTTGATGGAACTAGCTCTGCATCCACTCCTAGCGGTTATCTTTCGTACCAGATTGATCTATGGGCAATTTTACCAGAGTGGGTCAATATTGGGTTTTCGGGTGCAACTGGGACGTCCAATGAGGAAAATGTTATCCATTCCTGGGAGTTCAGTTCAAGCCTAGATCTAAATTCCACGCATAGAGAGGTGAAAAAAGAGATTGGCATCGCAACCAAATGCAAGGTTCAGGTCAAAGTAGTAGTTGTTACAGTGATTTGTTCTATTGTTTTTGTTCTCGTGGTAATTAGTATTTCTCGGTTGACCATCAAAAACAGAAGAACCAAGGATGGTTTTGGTTTCGATAGAGAAGCTATGCCTAGAAGGTTTGGTTATGACGAAATAGTTGCAGCCACCAACGGGTTTGCAGATGATAGAAGGCTGGGAGAAGGAGGCTCCGGACAAGTTTACAAAGGGTTTCTGAGTGATTTAGGGCGCGTGGTTGCTGTGAAAAGGATTTTTTCTGATGTTGAAGATTCCGAGAGAGTATTTAGAAATGAGGTGAAGATTATAAGTCGTCTTATACACAGAAACCTCGTGCAATTCATGGGGTGGTGCCACGAGAAAGGGGAGCTGTTACTGGTTTTTGAGTACATGGCTAATGGAAGCCTTGACAATCATCTCTTTGGGAACAGAAGAACTTTGACCTGGGATGTGAGATACAAGATAGCGTTAGGTGTGGCCAGAGCACTTCGTTATCTTCATGAAGACGCGGAGCAGTGTGTTGTTCATAGGGACATAAAGTCAGGTAATGTTTTGTTAGACACAGATTTCAACACTAAGATCAGTGACTTTGGGATAGCAAAGTTGGTGGATCCAAGATTGAGGACTCAGAGGACAAGGGTGGTGGGGACATATGGGTACCTAGCTCCAGAATATATAAACGAAGGGAGGGTTAGCAAAGAATCAGACATGTACGGTTTTGGGGTGTTGGCTTTGGAGATAGCATGTGGAAGGAGGACATACCAGGATGAGGAATACAATCATGTGCCTTTGGCGAAATGGGTATGGAAACATTATGTGGATGGGAAGATTCTGAATGCTGCTGATGAAGAATTGAAGATGGATTTTGATGTGAATGAAATGACATGCTTGCTCACTGTGGGAATGTGGTGTACCCTCCAAGACCACAAGGAAAGGCCAACGTCAGAACAGGTTATAAATGTTCTTAACCAAGAAGTCCCATTGCCAATGTTTTCTGCAAAAATCTCAGATGATGAGGCACCTGATTCCTTTGAATCCTCATCCACACAAGCATAA	1911	0.4349	MLATFENFHCFKIFLLLLILFILPINIVQPFSFSITNFNDTESASLVGYAGVAKIENGTAVLNPLIKNGVGRAIYGHPLRLKNSSNGLVTDFSTRFSFTIDVTLGTTYGDGFAFYLAPLAYQIPTTTSDGSRLGLYDDTQSNIVAVEFDTYVNELDPPMQHVGINNNSVASLNYTKFDIESNTGNMGHALITYNASAKLLAVSWFFDGTSSASTPSGYLSYQIDLWAILPEWVNIGFSGATGTSNEENVIHSWEFSSSLDLNSTHREVKKEIGIATKCKVQVKVVVVTVICSIVFVLVVISISRLTIKNRRTKDGFGFDREAMPRRFGYDEIVAATNGFADDRRLGEGGSGQVYKGFLSDLGRVVAVKRIFSDVEDSERVFRNEVKIISRLIHRNLVQFMGWCHEKGELLLVFEYMANGSLDNHLFGNRRTLTWDVRYKIALGVARALRYLHEDAEQCVVHRDIKSGNVLLDTDFNTKISDFGIAKLVDPRLRTQRTRVVGTYGYLAPEYINEGRVSKESDMYGFGVLALEIACGRRTYQDEEYNHVPLAKWVWKHYVDGKILNAADEELKMDFDVNEMTCLLTVGMWCTLQDHKERPTSEQVINVLNQEVPLPMFSAKISDDEAPDSFESSSTQA*	637

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu8g00719	636	FunFam	L-type lectin-domain containing receptor kinase IX.1	29	272	-	-
	Lapu8g00719	636	PANTHER	-	50	611	-	-
	Lapu8g00719	636	CDD	lectin_legume_LecRK_Arcelin_ConA	31	259	IPR001220	GO:0030246
	Lapu8g00719	636	Pfam	Legume lectin domain	32	265	IPR001220	GO:0030246
	Lapu8g00719	636	Gene3D	Transferase(Phosphotransferase) domain 1	416	623	-	-
	Lapu8g00719	636	FunFam	L-type lectin-domain containing receptor kinase IX.1	324	415	-	-
	Lapu8g00719	636	SMART	serkin_6	339	613	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu8g00719	636	ProSitePatterns	Legume lectins alpha-chain signature.	229	238	IPR000985	-
	Lapu8g00719	636	Gene3D	Phosphorylase Kinase; domain 1	324	415	-	-
	Lapu8g00719	636	Gene3D	-	29	273	-	-
	Lapu8g00719	636	SUPERFAMILY	Concanavalin A-like lectins/glucanases	29	264	IPR013320	-
	Lapu8g00719	636	SUPERFAMILY	Protein kinase-like (PK-like)	323	614	IPR011009	-
	Lapu8g00719	636	ProSitePatterns	Protein kinases ATP-binding region signature.	345	368	IPR017441	GO:0005524
	Lapu8g00719	636	ProSiteProfiles	Protein kinase domain profile.	339	616	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu8g00719	636	Pfam	Protein kinase domain	340	605	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu8g00719	636	FunFam	L-type lectin-domain containing receptor kinase IX.1	416	617	-	-
	Lapu8g00719	636	ProSitePatterns	Legume lectins beta-chain signature.	144	150	IPR019825	-
	Lapu8g00719	636	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	459	471	IPR008271	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu8g00719	Lapu-Chr8	25167455	25169365	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu8g00719	16	620	Receptor kinase-like Gene Family	AT5G10530	43.800	2.17e-161	476

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Lapu8g00719		Pkinase	5.3e-52	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu8g00719	-		-	gmx:100801935	903.279