Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00717 ATGACTAATGGAAGCCTCGACGATCATCTCTTTGGGAACAGAAAAAGTTTGACATGGGATGTAAGATACAAGATAGCGTTAGGTGTGGCTAGAGCACTTCGTTATCTTCATGAAGACGCGGAGCAGTGTGTTGTTCATAGGGATATAAAGTCAGGTAATGTTTTGTTAGACACAGATTTCAACACTAAGATCAGTGACTTTGGGACAGCAAAGTTGGTGGATCCAAGATTGAGGAGTGAGAGGACAAGGAAGGAGGGGGCATATGAATACGTAGCTCCAGAATATATAAAGGAAGGGAGGGTTAGCAAAGAATCAGACATGTACAGTTTTGGGGTGTTGGCTTTGGAGATAGCATGTGGAAGGAGGACTTGGCAGGATGGGGAGTATAATGATGTGCCTTTGGCGAGATGGGTATGGAAACATTATGTAGATGGGAAGATTTTGAATGCTGCTGATGAAGAATTGAAGAGGAATTTTGATGTGAATGAAATGACATGCTTGCTCACTGTGGGAATATGGTGTACCCTCCAAGACCACAAGGAAAGACCAACAGCAGAACAGGTTATTAATGTTCTTAAACAAAAAGTGTCACTGCCAAAGCTTTCTACTAAACATGCCTGA 621 0.4235 MTNGSLDDHLFGNRKSLTWDVRYKIALGVARALRYLHEDAEQCVVHRDIKSGNVLLDTDFNTKISDFGTAKLVDPRLRSERTRKEGAYEYVAPEYIKEGRVSKESDMYSFGVLALEIACGRRTWQDGEYNDVPLARWVWKHYVDGKILNAADEELKRNFDVNEMTCLLTVGIWCTLQDHKERPTAEQVINVLKQKVSLPKLSTKHA* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00717 206 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 1 199 - -
Lapu8g00717 206 SUPERFAMILY Protein kinase-like (PK-like) 1 192 IPR011009 -
Lapu8g00717 206 FunFam L-type lectin-domain containing receptor kinase IX.1 1 202 - -
Lapu8g00717 206 Pfam Protein kinase domain 1 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00717 206 SMART serkin_6 1 198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00717 206 Gene3D Transferase(Phosphotransferase) domain 1 1 206 - -
Lapu8g00717 206 ProSiteProfiles Protein kinase domain profile. 1 206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00717 206 ProSitePatterns Serine/Threonine protein kinases active-site signature. 44 56 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00717 Lapu-Chr8 25143846 25144834 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00717 1 204 Receptor kinase-like Gene Family AT5G10530 49.038 8.93e-63 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lapu8g00717 Pkinase 1.2e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00717 - - vra:106763733 356.681