Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00716 ATGAATTTTTTAGCTTCAGAAAAAATTGGGACAAAAAAACTGTCACTGAGAATGAGATTTCTAGACATGGTGACAATTTTTGTTCTATTCTTTGCCTTTCCTTCTCCTTCCCTTAAAACAGTGGAATCACTAAGTTTCAACATAACAAACTTCGACGACCCTGAGAGTGCAAAAAACATGGCGTACATGGGTGACGGCAAAGCAAAGGGCGGTTCCATAGACCTTAACATAGTCTCGTATTTTTTTCGTGTTGGAAGAGCCTTGTATGCACAACCTTTGCACCTTTGGGATTCATCTTCAAGGGTTGTAACAGACTTTACCACACGCTTCACTTTCTCCATTGAAAAAAGCGATGAAATCGCCACCTACGCTGATGGTTTCGCCTTCTACATAGCCCCTCATGGCTACCAGATTCCTCCCAACGGTGCAGGTGGCACTTTTGGCCTTTTCAACGGCACCTTCAATAGCTTCCTTCCCCAATATCGCATTCTCGCAGTTGAGTTTGACACATTTAATGGCACAATTGACCCTCCCATGCAGCACGTTGGCATAGATGATAACTCCATCAAATCAGTTGTTTCTGCCAAGTTTGACATCGACGAAAATCTGGGAAAGAAATGTAACGCTTTGGTAACCTACAATGCTACCAACAAGACCCTCTTTGTGGCTTGGTCCTTCAACGGAACCGCAACGCCAGACTCCAATTCTTCACTTTCTTACAAGATTGACCTCTTGGAAATTCTACCCGAGTGGGTCGATGTTGGGTTCTCTGCTTCCACTGGAGAATTCACTGAACGAAACCTCATTCACTCGTGGGAGTTCAGTTCCACGTTGAATTCTTCCACTGCTTCAAATAACAATTCCTCTGGTGGCAATGAGAAGAGCGGGAAAGGGTTGAGCATGGTTATGATGGTTGTTGTGGTGACGTGTTCAATGGTTTTGGTGGCTGTGGCAGCGAATGTTGCAGCTTGGATAGTAATCACAAAGAAGAGAAGGGGTAAGGGTGATGGTGGTTATGATGATGGTAGTATAGGTAGAGCCGCCTCGGTAAGGTTTACTCTGGATAGGGAAACTATACCAAGAAGGTTTGATTACACAGAACTAGTTGAAGCCACCAAAGGGTTCGCGGATGAAACAAGGCTTGGAAGAGGAGGTTCGGGACAGGTTCACAAAGGGGTTCTGAGCTACTTAGGAAGGGTTGTTGCTGTAAAAAGGATTTTCACTAACTTTGAAAATTCGGAGAGGGTTTTCATCAACGAGGTTAGGATCATAAGCCGTCTTATACACAGAAACTTGGTGCAGTTCGTAGGTTGGTGCCACGAGCAAGGAGAGTTTCTGTTGGTTTTTGAGTACATGCCTAATGGAAGCCTCGACACTCATCTATTTGGAGACAAAAAACCTTTGGCCTGGGATACTAGGTACAAGGTAGCGTTAGGCGTGGCTTTGGCACTTCGTTATCTTCACGAGGATGCGGAGCAGAGTGTTCTTCATAGGGATATTAAGTCGGCTAATGTGTTGTTGGACACGGATTTCAGCACGAAGCTTGGAGATTTTGGGATGGCAAAGTTGGTGGATCCAAGATTGAAGACTCAGAGAACAGGGGTGGTGGGGACTTACGGGTACCTTGCCCCAGAATACATGAATGGAGGTAGGGCTAGCAAGGAATCAGACATGTATAGTTTTGGTGTTGTGGCTCTTGAAATCGCATGTGGAAGGAGGACTTATCTGGATGGGGAGTTTCATGTGGCTCTGATGAACTGGGTGTGGCAACAGTATGTGGAAGGGAATGTTATGGATGTTGTTGATGAGAGATTGAACAATGAGTTTGATGTGGATGAAATGAGAAGCTTGATCATTGTGGGGTTGTGGTGTACTAACCCTAACGACAAGGAGAGGCCAAAGGCAGCAGAAGTGATAAAAGTTCTTCAGCTTGAAGCACCATTGCCAACGCTTCCAAATGATATGCATGATCGTGCTCCTCTTTCTCTAAGTACTTACACGCATGCACAACCCACTTATAATTCCTTGCAATCACCACCCTTCACTAACAGCCTTTCCAGTATTGGACGTTAA 2073 0.4496 MNFLASEKIGTKKLSLRMRFLDMVTIFVLFFAFPSPSLKTVESLSFNITNFDDPESAKNMAYMGDGKAKGGSIDLNIVSYFFRVGRALYAQPLHLWDSSSRVVTDFTTRFTFSIEKSDEIATYADGFAFYIAPHGYQIPPNGAGGTFGLFNGTFNSFLPQYRILAVEFDTFNGTIDPPMQHVGIDDNSIKSVVSAKFDIDENLGKKCNALVTYNATNKTLFVAWSFNGTATPDSNSSLSYKIDLLEILPEWVDVGFSASTGEFTERNLIHSWEFSSTLNSSTASNNNSSGGNEKSGKGLSMVMMVVVVTCSMVLVAVAANVAAWIVITKKRRGKGDGGYDDGSIGRAASVRFTLDRETIPRRFDYTELVEATKGFADETRLGRGGSGQVHKGVLSYLGRVVAVKRIFTNFENSERVFINEVRIISRLIHRNLVQFVGWCHEQGEFLLVFEYMPNGSLDTHLFGDKKPLAWDTRYKVALGVALALRYLHEDAEQSVLHRDIKSANVLLDTDFSTKLGDFGMAKLVDPRLKTQRTGVVGTYGYLAPEYMNGGRASKESDMYSFGVVALEIACGRRTYLDGEFHVALMNWVWQQYVEGNVMDVVDERLNNEFDVDEMRSLIIVGLWCTNPNDKERPKAAEVIKVLQLEAPLPTLPNDMHDRAPLSLSTYTHAQPTYNSLQSPPFTNSLSSIGR* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00716 690 FunFam L-type lectin-domain containing receptor kinase IX.1 42 293 - -
Lapu8g00716 690 Gene3D Transferase(Phosphotransferase) domain 1 452 659 - -
Lapu8g00716 690 ProSitePatterns Serine/Threonine protein kinases active-site signature. 495 507 IPR008271 GO:0004672|GO:0006468
Lapu8g00716 690 ProSiteProfiles Protein kinase domain profile. 375 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00716 690 ProSitePatterns Protein kinases ATP-binding region signature. 381 404 IPR017441 GO:0005524
Lapu8g00716 690 PANTHER - 76 647 - -
Lapu8g00716 690 Gene3D - 41 291 - -
Lapu8g00716 690 ProSitePatterns Legume lectins beta-chain signature. 164 170 IPR019825 -
Lapu8g00716 690 CDD STKc_IRAK 381 643 - -
Lapu8g00716 690 Pfam Protein kinase domain 376 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00716 690 SUPERFAMILY Protein kinase-like (PK-like) 358 669 IPR011009 -
Lapu8g00716 690 FunFam L-type lectin-domain containing receptor kinase IX.1 360 451 - -
Lapu8g00716 690 Pfam Legume lectin domain 43 286 IPR001220 GO:0030246
Lapu8g00716 690 CDD lectin_legume_LecRK_Arcelin_ConA 44 278 IPR001220 GO:0030246
Lapu8g00716 690 Gene3D Phosphorylase Kinase; domain 1 360 451 - -
Lapu8g00716 690 ProSitePatterns Legume lectins alpha-chain signature. 248 257 IPR000985 -
Lapu8g00716 690 SUPERFAMILY Concanavalin A-like lectins/glucanases 42 278 IPR013320 -
Lapu8g00716 690 SMART serkin_6 375 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00716 690 FunFam L-type lectin-domain containing receptor kinase IX.1 452 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00716 Lapu-Chr8 25140252 25142685 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00716 28 655 Receptor kinase-like Gene Family AT5G10530 42.543 5.06e-164 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lapu8g00716 Pkinase 1.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00716 - - gmx:100305427 996.112