Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00715 ATGTTGGCTACCATGGAACGTTCCCACCACTTCAAAACTTTTCTTCTTTTCTACATCTTCCTCCTTCTTCCAATAATCATAGCTCAACCACTTTCCTTCAACATAACTAACTTTAACGATACTCAAAGTGCAAGCCTTGTTGGATATGCTGGTGTAGCCACGACTCAGAACAGAACCTTAGTGCTAAATCAACTCATCGACAATGGAACTGGAAGAGCCTTCTATGGCCTCCCTCTACGCTTCAAAAACTCATCTAATGGACATGTCACTGATTTTTCTACTCGTTTTTCATTCACTATCCGTGTGTCCACTACAACCAACTATGGCGACGGTTTTGCCTTCTACGTCGCACCCCTTGCCTACCCGATTCCGCCGGATTCAGGTGGTGGCAGTCTCGGCCTTTACGGTGCCAACCAAAAGAACATCATTGCTGTCGAATTTGACACTTTTCCAAATGCTAATTCTGATCCACCAATGAAGCATGTGGGGATAAACAATAACTCTGTGGTGTCTCTCAACTCTTCGTTGTTTGATGTTGACAGCAACATAGGGAACATGGGGCATGTGTTGATAACTTACAATGCTTCGGCCAAACTCCTTAATGTCTCATGGTTCTTTGAGGGAACTAGTTCTGGTTTTATGCCAAACACTTCTCTTTCGCACCAGATTGACCTGGGAGAAATTCTTCCAGAATGGGTCACTGTTGGGTTTTCGGGGTCAACCGGGTTGTCTAATGAGGAGAATGTTATTCACTCCTGGGAATTCACGTCAACTCTGAATTCCACACATGAGGAGGTGAACAATAAAGAAAATGATGGCAATGATATCACAGTTAAATACAAGTTTCCAGTCCAAGCAGTAGCTGTTGCAGTGAGTTGTTCCATTTTTTGTGTGCTCGTGGTCGTTGGTGTTTCTTGGTTTATCATCATCCAGAAGAGAAGAATCGATTATGGTTTTGGTTTCAACGGAATAGCTTTGCCTAGAAGGTTTGGTTATAACGAGTTAGTTGCAGCCACCAACGGGTTTGCAGATGATAGAAGGCTGGGAGAAGGAGGCACTGGACAAGTTTACAAAGGGTTCCTGAGTGATCTGGGGCGCGTGGTTGCAGTGAAAAGGATTTTTTCTGATGTGGAAGATTCAGAGAGAATATTCACAAACGAGGTGAAGATTATAAGCCGTCTTGTGCATAGAAACCTTGTGCAATTCATGGGGTGGTGTCATGAGCAAGGAGAGTTGTTACTGGTTTTTGCGTACATGACTAACGGAAGCCTTGACACTCATATCTTTGGCAACAGGAGAACTTTGAAATGGGATGTGAGATACAAGATAGCGTTAGGTGTGGCTAGGGCACTTCGGTATCTTCATGAAGACGTGGAGCAGTGTGTTCTTCATAGAGATATAAAGTCAAGTAATGTTTTGTTAGACACAGATTTCAACACTAAGGTTGGTGACTTTGGAGTAGCAAAGTTGGTGGATCCAAGATTGAGGACTCAGAAGACAAAGGTGGTGGGGACATATGGGTACCTGGCACCTGAATATGTGCAGGAAGGAAGGGTTAGCAAGGAGTCTGACATGTATGGTTTTGGGGTTGTGGCTTTGGAGATAGCATGTGGAAGGAGGATTTACCAAGATGGGGAGCATAACCATGTGCCTTTGACAAATTGGGTGTGGAAACAATATGTGGATGGAAACATTTTGAGTGCTTGTGATGAGGGATTGAAGGGAGATTATGATGTGCACCAAATGACATGTTTGCTCACTGTAGGAATATGGTGTACCCACCCAGATCACAAGCAAAGGCCAAAAGCTGAACAGGTTATTAATGCTCTGAAGCAAGAAACACCATTGCCAGTACTTTCATTATGA 1866 0.4368 MLATMERSHHFKTFLLFYIFLLLPIIIAQPLSFNITNFNDTQSASLVGYAGVATTQNRTLVLNQLIDNGTGRAFYGLPLRFKNSSNGHVTDFSTRFSFTIRVSTTTNYGDGFAFYVAPLAYPIPPDSGGGSLGLYGANQKNIIAVEFDTFPNANSDPPMKHVGINNNSVVSLNSSLFDVDSNIGNMGHVLITYNASAKLLNVSWFFEGTSSGFMPNTSLSHQIDLGEILPEWVTVGFSGSTGLSNEENVIHSWEFTSTLNSTHEEVNNKENDGNDITVKYKFPVQAVAVAVSCSIFCVLVVVGVSWFIIIQKRRIDYGFGFNGIALPRRFGYNELVAATNGFADDRRLGEGGTGQVYKGFLSDLGRVVAVKRIFSDVEDSERIFTNEVKIISRLVHRNLVQFMGWCHEQGELLLVFAYMTNGSLDTHIFGNRRTLKWDVRYKIALGVARALRYLHEDVEQCVLHRDIKSSNVLLDTDFNTKVGDFGVAKLVDPRLRTQKTKVVGTYGYLAPEYVQEGRVSKESDMYGFGVVALEIACGRRIYQDGEHNHVPLTNWVWKQYVDGNILSACDEGLKGDYDVHQMTCLLTVGIWCTHPDHKQRPKAEQVINALKQETPLPVLSL* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00715 621 ProSitePatterns Legume lectins beta-chain signature. 143 149 IPR019825 -
Lapu8g00715 621 Gene3D - 29 273 - -
Lapu8g00715 621 PANTHER - 50 613 - -
Lapu8g00715 621 ProSiteProfiles Protein kinase domain profile. 342 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00715 621 FunFam L-type lectin-domain containing receptor kinase IX.1 419 620 - -
Lapu8g00715 621 Gene3D Phosphorylase Kinase; domain 1 327 418 - -
Lapu8g00715 621 Gene3D Transferase(Phosphotransferase) domain 1 419 619 - -
Lapu8g00715 621 SUPERFAMILY Protein kinase-like (PK-like) 326 610 IPR011009 -
Lapu8g00715 621 SUPERFAMILY Concanavalin A-like lectins/glucanases 29 260 IPR013320 -
Lapu8g00715 621 CDD lectin_legume_LecRK_Arcelin_ConA 31 259 IPR001220 GO:0030246
Lapu8g00715 621 Pfam Protein kinase domain 343 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00715 621 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Lapu8g00715 621 ProSitePatterns Protein kinases ATP-binding region signature. 348 371 IPR017441 GO:0005524
Lapu8g00715 621 ProSitePatterns Legume lectins alpha-chain signature. 229 238 IPR000985 -
Lapu8g00715 621 Pfam Legume lectin domain 31 265 IPR001220 GO:0030246
Lapu8g00715 621 FunFam L-type lectin-domain containing receptor kinase IX.1 327 418 - -
Lapu8g00715 621 SMART serkin_6 342 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00715 Lapu-Chr8 25134909 25136828 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00715 13 619 Receptor kinase-like Gene Family AT5G10530 42.948 1.47e-163 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lapu8g00715 Pkinase 2.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00715 - - gmx:100800327 937.562