Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00698 ATGGAAGAAGAAGAATATAGAGTGTATATAGGGGGAATAATTGGGCAACTTCGTGGTCACTTCCCTGATGCTTCATTTATGGTGTTCAACATGCGGGAGGGAGACAGCCAAAGCCAGATTTCAAACATTTTGTGTGACTATGATATGACTGTGATAGACTATCCTCGACAGTATGAAGGTTGCCCATTGCTTACCATGGAGATGATCCACCATTTCTTGAGATCAGGTGAAAACTGGCTTCAACTTGGGCAACAAAATGTTGTCTTGATGCATTGTGAACGAGGTGGGTGGCCGTTATTAGCATTTCTGCTGGCTGCACTCTTGATCTATAGAAAGATGTTTACAGGGGAGCAGAAAACACTAGACATGATATACAAGCAAGCCCCTCGGGAACTTCTGCAGTTAATGTCACCGTTGAATCCATTACCTTCACAATTGAGATATCTTCAGTACATATCAAGAAGAAATGTTGGTTCAGAATGGCCTCCTCTTGATAGGGCACTTACTTTGGACTGTGTAATTATAAGACTCATTCCTAACATGGGTGGAGAGGGTGGCTGCCGTCCTATATTCAGGATATATGGACAAGACCCTTTTATTCCTGCAGATCGAACTCCCAAAGTTCTCTTTTCAACTCCAAAAAGGAGCAAACTTGTCCGCTATTGCAAGCAGACTGATTGTGAACTGGTTAAGATTGACATCCATTGTCATGTTCAAGGTGATGTCGTTTTTGAGTGTATTCATCTGCACAGTGATTTAGAGCATGAAGAAATGATGTTTCGGGTGATGTTTAATACAGCATTCATAAGATCAAATATTTTGATGCTTAACCGTGACGAAATTGACATACTATGGAATGCTAAAGATTACTTCCCTAAAAATTTTAGAGTGGAGGTTCTTTTCTCAGATATGGATGCTTCATCTTCTGTTATTTCAATTGATCTGCCTCGTGTTGAGGAGAAAGAAGGTCTGCCTGTTGAAGCATTTGAAAAGGTCAAAGAGATTTTCAGCAACGTGGATTGGCTAGATTCAAAGGAAGAAGTAGCAAGTGTGCTCCAACAGATCACGACTTCAAATATCCTTCTGGAAAGATTGGACACTGGGGTTTCTGCTGCAACAAGTGGCTTGAAAAAGGAGTCATCTGGAAAGTTTACACTTGATTCGAAGGCACACAGTGATACAAAGAATCTGACATCTGCAGTTCAGGGGAAACATTCTACATCCTCATTGGGATTATCTGTGGATGTTGCTATGGAAAATAAGACTGAACAATTAGAGTCAAAGACATTGTCTGAAAATGACATTGAGACTCTTGAATGTTCAGGTCGCGGGAACCAACCTATTCACTCATTTGGGCTCTCAAAAGATTCTAGTTCTACTGAAAAGCAAGTTGAATCGTTAGAATCAAAGGCATCGAGGGAAAACGATACCAAGGTTCCAACAACTATGGCTCATGTGGAGCAGTCCATGCCCTCTATTGAACCATCTAAGGATGCACATTCAATGACACAGGATGTGGGACCATTAGAGACGAAGGAAAAGACGGATGAAAATTCAATGAAAGAGAAGTCGGGGCAATTAGAGCAAATGGTATTGTCAGAAAATGATACCAAGAGTGTCACATCCACAGTTCAGGAGAAACAATATAGTTCCTTACTTGAACTGCCTGTTGATGTAAACACAATTAAAACAAAAATTGAACCACAAGAATTGCAGGTTTCCCTCCAGCTTCCCACTCAATCTAAAATAATTTCTCCCCGGGACCATGCACCGGTGGATATCAAAGAAGTAACTCATGCAGTGACAGTATCCCCTCTGCCGTCTGCGTTGCTTCCTTCAGACTCCAAAGTGTTAAATTCTGTACAGCCTTGTTCCACAAGTGTTCCTCCAGTGTCATCATCGCCTTTGCTTTCATCTTTACCATTAAAAACTTCAGTTGATGCTCTTAATGCCATGGAAAAGACTTCTGGATCCCTTGCTCCTGCAGCTGTTGCTCCTCCTCCTCCACCACCACCTCCTCAATGCAATAACACTTCAAATTTGATGCAATCTAATGTTACACAGTACTCCAAGAATACAAACGAAGGTCAGACCCCATTGGTTAGTCCTCCTCCTCCCCCTTCCCTTCCTGAAGCATCACTTTCCACAACCAAAGATTCATGTAAAGGTCCTCCTGCACCGCCACCTCCACCTACACTTATGAATGAATCAGTTACTATGCTTGGCCCTCCTCCCCCCCCACCTCCACCTCCTAGCCTTTCAGGTTCTACTCCACCATTAGCACCACCACCGCCCCCTCCTCCAGCTTCTGCATTCCAAAATTCTTTGTCAGAGAACTCCACAAATGGTCCTCCTGCACCCCCACCTCCACCCTCTAGCCTTTCTGGTTCGACTCCATCACCGTTAGCACCACCACCACCCCCTCCTCCAGGTTCTGCATCCCAAAATCCTTTGTCTAGCTCCACAAATGTTCCACCTGTACCCCCACCTCCCCTTTCTGCCAATGGATTGTCAAAACCTGCAGTTCCTGGACCACCTTCTATTCCTGGGGCACCTTCTGTTCCTGGACCACCTTCTGCTCCATTTGGTGCAAAGGGCCGTGGCCTCATGCGAGCTAATCCAAAAGGTCAGTCTAAGAGGAGCAATCTGAAACCTTACCATTGGTTAAAATTAACCAGGGCCATGCAAGGGAGCTTATGGGCTGAGACACAGAAACTAGATGAATTTTGTAGGGCTCCAGAGTTTGACATGTCAGAACTTGAAACTTTGTTCTCCGCAGCTGCTCCAGCTGCTGATGGAAAAGAAGGAAAATCAAATCGCCGTGCCTCGGGGCAAAAAGTTGAGAAAGTTCAACTGATTGAGCTTAGGCGAGCATATAATTGTGAGATCATGCTTACAAAAGTCAAAATTCCTTTGCCTGATTTGATGTGTGCTGTGCTTGCAATGGACGATACAGTATTAGATGTTGATCAAATTGATAACCTCATAAAATTTTCTCCAACCAAAGAAGAGATGGAAACACTCAAGAACTATACTGGGAATAAGGACAACTTGGGAAAGTGTGAACAGTTCTTCATAGAATTAATGACAGTGCCAAGAGTGGAAAGCAAGCTTAGAGTTTTCTCTTTTAAGATGCAATTCTTATCCCAGGTTTCAGAGCTTAAAAGAGACTTGAACATTGTGAATTCTGCATCTGAAGAGATAAGGAATTCAGTCAAGTTGAAAAGAATCATGCAGACCATTCTTTCTCTGGGTAATGCTTTGAACCATGGAACTGCAAGAGGTTCGGCTGTTGGGTTTCGATTGGATAGTCTCCTTAAACTCACTGATACTCGAGCTAGGAACAACAAGATGACTCTTATGCATTATCTCTGTAAGGTGCTGGCTGAAAAACTCGGAGAACTTCTCGATTTCCAGAAAGACCTAGTGAGTTTGGAGGCTGCAACCAAGATACAATTAAAATACTTGGCAGAGGAAATGCAAGCTATTAGTAAAGGACTGGAGAAAGTAGTTCAGGAATTGACTGCATCAGAGAATGATGGACCTGTGTCAGAAAACTTCTGCCAGATTCTGAAGGAATTTCTTTCTTATGCTGAAGGTGAAGTTAGGTCTTTGGCTCAACTTTATGCCAATGTGGGTAGAAATGCAGATGCATTGGCTTTATACTTTGGTGAAGATCCAGCACGTTGCCCATTTGAACAAGTTGTATCTACGCTGCACAACTTTGTGAGATTGTTTGTAAAAGCACACCAAGAAAATTGCAAGCAGATTGAACTCGAAAGAAAGAGAGCAGACAAGGAAGCAGAAAATGAGAAGTTGAAGCTAGCTGCTGCCAAGAAGGAGTCTGAACAGATGATAAGGACCACCATAAAGAGTGGGGATATTAAATGA 3891 0.4295 MEEEEYRVYIGGIIGQLRGHFPDASFMVFNMREGDSQSQISNILCDYDMTVIDYPRQYEGCPLLTMEMIHHFLRSGENWLQLGQQNVVLMHCERGGWPLLAFLLAALLIYRKMFTGEQKTLDMIYKQAPRELLQLMSPLNPLPSQLRYLQYISRRNVGSEWPPLDRALTLDCVIIRLIPNMGGEGGCRPIFRIYGQDPFIPADRTPKVLFSTPKRSKLVRYCKQTDCELVKIDIHCHVQGDVVFECIHLHSDLEHEEMMFRVMFNTAFIRSNILMLNRDEIDILWNAKDYFPKNFRVEVLFSDMDASSSVISIDLPRVEEKEGLPVEAFEKVKEIFSNVDWLDSKEEVASVLQQITTSNILLERLDTGVSAATSGLKKESSGKFTLDSKAHSDTKNLTSAVQGKHSTSSLGLSVDVAMENKTEQLESKTLSENDIETLECSGRGNQPIHSFGLSKDSSSTEKQVESLESKASRENDTKVPTTMAHVEQSMPSIEPSKDAHSMTQDVGPLETKEKTDENSMKEKSGQLEQMVLSENDTKSVTSTVQEKQYSSLLELPVDVNTIKTKIEPQELQVSLQLPTQSKIISPRDHAPVDIKEVTHAVTVSPLPSALLPSDSKVLNSVQPCSTSVPPVSSSPLLSSLPLKTSVDALNAMEKTSGSLAPAAVAPPPPPPPPQCNNTSNLMQSNVTQYSKNTNEGQTPLVSPPPPPSLPEASLSTTKDSCKGPPAPPPPPTLMNESVTMLGPPPPPPPPPSLSGSTPPLAPPPPPPPASAFQNSLSENSTNGPPAPPPPPSSLSGSTPSPLAPPPPPPPGSASQNPLSSSTNVPPVPPPPLSANGLSKPAVPGPPSIPGAPSVPGPPSAPFGAKGRGLMRANPKGQSKRSNLKPYHWLKLTRAMQGSLWAETQKLDEFCRAPEFDMSELETLFSAAAPAADGKEGKSNRRASGQKVEKVQLIELRRAYNCEIMLTKVKIPLPDLMCAVLAMDDTVLDVDQIDNLIKFSPTKEEMETLKNYTGNKDNLGKCEQFFIELMTVPRVESKLRVFSFKMQFLSQVSELKRDLNIVNSASEEIRNSVKLKRIMQTILSLGNALNHGTARGSAVGFRLDSLLKLTDTRARNNKMTLMHYLCKVLAEKLGELLDFQKDLVSLEAATKIQLKYLAEEMQAISKGLEKVVQELTASENDGPVSENFCQILKEFLSYAEGEVRSLAQLYANVGRNADALALYFGEDPARCPFEQVVSTLHNFVRLFVKAHQENCKQIELERKRADKEAENEKLKLAAAKKESEQMIRTTIKSGDIK* 1297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00698 1296 Gene3D Protein tyrosine phosphatase superfamily 1 157 IPR029021 -
Lapu8g00698 1296 MobiDBLite consensus disorder prediction 722 771 - -
Lapu8g00698 1296 MobiDBLite consensus disorder prediction 439 460 - -
Lapu8g00698 1296 Pfam C2 domain of PTEN tumour-suppressor protein 166 302 IPR014020 -
Lapu8g00698 1296 SUPERFAMILY Formin homology 2 domain (FH2 domain) 763 1265 - -
Lapu8g00698 1296 SMART it6_source 699 1294 IPR015425 -
Lapu8g00698 1296 Pfam Formin Homology 2 Domain 879 1246 IPR015425 -
Lapu8g00698 1296 MobiDBLite consensus disorder prediction 476 499 - -
Lapu8g00698 1296 MobiDBLite consensus disorder prediction 662 676 - -
Lapu8g00698 1296 ProSiteProfiles C2 tensin-type domain profile. 165 304 IPR014020 -
Lapu8g00698 1296 MobiDBLite consensus disorder prediction 659 881 - -
Lapu8g00698 1296 MobiDBLite consensus disorder prediction 439 525 - -
Lapu8g00698 1296 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 40 153 IPR029021 -
Lapu8g00698 1296 MobiDBLite consensus disorder prediction 677 698 - -
Lapu8g00698 1296 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 167 304 IPR035892 -
Lapu8g00698 1296 Gene3D Formin, FH2 domain 892 1287 IPR042201 -
Lapu8g00698 1296 MobiDBLite consensus disorder prediction 507 523 - -
Lapu8g00698 1296 SMART PTEN_C2_2 163 303 IPR014020 -
Lapu8g00698 1296 Coils Coil 1247 1288 - -
Lapu8g00698 1296 PANTHER FORMIN-J 762 1283 - -
Lapu8g00698 1296 MobiDBLite consensus disorder prediction 461 475 - -
Lapu8g00698 1296 MobiDBLite consensus disorder prediction 822 859 - -
Lapu8g00698 1296 Gene3D - 162 307 - -
Lapu8g00698 1296 MobiDBLite consensus disorder prediction 782 814 - -
Lapu8g00698 1296 ProSiteProfiles Formin homology-2 (FH2) domain profile. 873 1272 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00698 Lapu-Chr8 24990751 25010577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00698 1 368 FH2 protein (formin) Gene Family AT2G25050 69.919 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00698 - - pvu:PHAVU_001G042000g 2028.83