Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00670 ATGAAATCAGCACCAGATCATAGTTCAGTGTATGTGATTTCAAAAGGGAAGATAGCAGGAGCTCGACCAGCAATTCGACCAATGTTAAACATGATTACACCACCAAAAGAAAATGGAATAAGTGAGAATAGGACACATGCACATAAAAGTGGGAGCACCAATGGAAGATCAGAAAGATCACCTCTACTTGAATTGCCAAGGTGTTCTTCAGTTGGTCAATCAATGGATCACAGGTTACTATATTTCAACAACTCAGCTGAAAGTGACTCTTCAAGGTCGCGAAAGTTAGGATCAGTAGATGGAATTAAACAACAATATAATCCAGGATTTCTATCAGATTCTCAATTCGCAGCAGAGATGGAAAGTGAGATGAAAAGGTTGAGGCTCAAATTGAAGCAAACTATGGATATGTACAATTCAGCTTGCGAAGAATCAACATTAGCCGAAAACAAGGCTAAAGAGATTAAACAATGGAAACTGGACCAGGAACGTATAGCTGAGGTGGCTAAGTTGTCTAAAGAAGCAGTTCTTGCAATGGCAGAAAATGAGAAATTTAAAGCCAAAGCTGCCTTGGAAGCAGCTGAGGAAGCCATTAAGATGGTTGAAAAGGAAGCACAAAGAAGATTTCATGCAGAGATGAAGGCTAGAAGAGAGGCACAAGAAAAGGATCGAGCATTAAATCAATTGGCATTCAGGGATATGCGATGCAGAAAATACACTATAAATGATATTGAAGAGGCCACTCAAAAGTTCTCCCAAACATTGAAAGTAGGTGAAGGTGGATATGGACCAGTGTTTAAAGGTCAACTTGATCATACCCAAGTAGCAATCAAAATTTTGAACCCTGATGCTACCCATGGCAGGAGGCAGTTTCAACAAGAGGTTGAGGTATTATGCAGCATAAGACATCCTAACATGGTTCTCCTTATTGGTGCATGTCCTGAGTACGGATGTTTAGTGTACGAGTACTTAGAGAATGGTAGCTTAGAAGATAGATTATTGATGAAAAATGATAGCCCTCCAATTCCATGGTGGAAACGTTTTGAAATAGCTGCTGAGATTGCAACTGCACTCCTTTTCCTTCACCAAACAAAGCCAGAACCAATTGTGCATAGGGACCTCAAACCTGCCAACATTCTCTTGGACAAGAATTTTGTGAGCAAAATTAGCGATGTTGGTCTTGCAAGACTAGTGCCAGCTTCAGTGGCTGATTCTGTCACACAATATTACTTGACTGCTGCAGCTGGAACCTTTTGTTACATTGACCCCGAGTACCAACAATCTGGGATGCTAACAACAAAATCAGACATGTATTCCTTAGGGATAATGCTTTTACAAGTCATCACAGCCAAACCTCCAATGGGGCTCGCTCACCATGTTAAGAAGGCCGTTGAAGAGGGAAAATTTTCAGAAATGCTTGATCCTGTAATCACTGATTGGCCCCTTGAAGAGGCTCTTGAATTTGCCAAACTCGCATTGAGTTGTGCAGAGTTAAGCAAAAAGGATAGACCTGATCTTGCAAGTGTGGTAGTGCCAAAGCTTAACCTTTTGAGGGACTTTGGGTTAGCATCACAGAACAAATGA 1584 0.4104 MKSAPDHSSVYVISKGKIAGARPAIRPMLNMITPPKENGISENRTHAHKSGSTNGRSERSPLLELPRCSSVGQSMDHRLLYFNNSAESDSSRSRKLGSVDGIKQQYNPGFLSDSQFAAEMESEMKRLRLKLKQTMDMYNSACEESTLAENKAKEIKQWKLDQERIAEVAKLSKEAVLAMAENEKFKAKAALEAAEEAIKMVEKEAQRRFHAEMKARREAQEKDRALNQLAFRDMRCRKYTINDIEEATQKFSQTLKVGEGGYGPVFKGQLDHTQVAIKILNPDATHGRRQFQQEVEVLCSIRHPNMVLLIGACPEYGCLVYEYLENGSLEDRLLMKNDSPPIPWWKRFEIAAEIATALLFLHQTKPEPIVHRDLKPANILLDKNFVSKISDVGLARLVPASVADSVTQYYLTAAAGTFCYIDPEYQQSGMLTTKSDMYSLGIMLLQVITAKPPMGLAHHVKKAVEEGKFSEMLDPVITDWPLEEALEFAKLALSCAELSKKDRPDLASVVVPKLNLLRDFGLASQNK* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00670 527 Coils Coil 177 204 - -
Lapu8g00670 527 ProSiteProfiles Protein kinase domain profile. 251 517 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00670 527 Gene3D Transferase(Phosphotransferase) domain 1 324 521 - -
Lapu8g00670 527 Pfam Protein kinase domain 253 509 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00670 527 ProSitePatterns Serine/Threonine protein kinases active-site signature. 369 381 IPR008271 GO:0004672|GO:0006468
Lapu8g00670 527 Coils Coil 117 137 - -
Lapu8g00670 527 PANTHER OS02G0152300 PROTEIN 1 523 - -
Lapu8g00670 527 SUPERFAMILY Protein kinase-like (PK-like) 232 510 IPR011009 -
Lapu8g00670 527 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 224 323 - -
Lapu8g00670 527 SMART serkin_6 251 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00670 527 MobiDBLite consensus disorder prediction 33 62 - -
Lapu8g00670 527 Gene3D Phosphorylase Kinase; domain 1 220 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00670 Lapu-Chr8 24621064 24626659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00670 1 521 Receptor kinase-like Gene Family AT5G12000 56.577 0.0 606
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lapu8g00670 Pkinase 1.5e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00670 - - var:108336981 848.58