Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00667 ATGGAGGAGATGTCATTTGTGGTTGCAGTGCCATTAAGAGTAGGTAATTGTTGTTCAGTCTGTGATAACCCAACCGTAGTTCCCCACATGGATGTATCCAGGTTTAAGCTGATGGCGGATACAGGGTTGTTATCTAATTCTGTAACTAAGGTTTTCACCAAGACAGTTGCAGGTTCCGATGATTGTGATGATAGTGGCAATTTGGAGGATGAAGCTGGTATTGCTGAGGTTATACCACCAAAACGGGATAGAGAAGGAGAGAGTCCTATGTTAGATATGATATCCCAAAATAGAAGCACTTTGGTTGCTGGTGATGAAGTGTTAGCCGATGAAATTGAGGAGGATTCGTTGTCATTGGAAGGTGACCAGGTTGTTGATAGCTCATGTTCTCTTTCGGCAGTCAGTGAGAACAGTAGTGTGTGTGGAGAGGAGTCCTTCTGTATTGATGCTACTTCAGATGTTGGGACACCATGCTCTGCTTATGTAGATAAGAGCATGGGTGCTGTCAATGTTGTTACTGAGGCGGTTGATTTGGGGGAATCAAATGTTAACACAGATATTATGACTGAACCTCTTGCTGTGGCCGTGAGCCTTGAAGAAGAGAATGGAATTAGAACTGACCCTAAGCCTTCTGATGTTGTTCATCATCAGTTGCCCCAGGAAAGGGGGGTGACTGGAATGGTTGGTCGGAGTGTTTTTGAATTGGATTATACCCCACTTTATGGATTCATATCTCTGTGTGGAAGAAGACCTGAGATGGAAGATGCACTTGCAACTGTACCTCGATTCTTGAAAATTCCTATTCAGATGCTAGTTGGTGATCGGGTGCTAGATGGAATAAGCAAGTGTTTTAATCAGCAGATGACTCATTTCTTTGGAGTCTATGATGGCCATGGTGGCTCTCAGGTTGCAAAGTATTGTCAAGATCGTATCCACAAGGCTTTGGCTGAGGAAATAGAATTTTTCAAGGAAGCTCTAATCAGTGGAAGTATGAAGGATGGTTGTCAAGATCAGTGGAAAAAAGCTTTCACCAATTGTTTCTTAAAGGTTGATGCTGAAGTTGGAGGGAAAGTTGATAATGAACCTGTTGCCCCAGAAACTGTCGGCTCCACTGCTGTTGTTGCTGTTATTTGTTCATCTCATATCATAGTTGCAAATTGTGGTGATTCAAGAGCAGTTCTATGTCGTGGCAAAGAACCCATGGCATTATCAGTGGACCATAAACCTAACCGCCCCGATGAATATGCAAGAATTGAGGCAGCTGGAGGAAAAGTGATTCAATGGAATGGTCATCGTGTATTTGGTGTTCTTGCAATGTCAAGGTCTATCGGTGATAGATATTTGAAGCCATGGATTATTCCTGAGCCAGAAGTTATGTTTATTCCCCGTACAAAAGACGACGAGTGTCTCATTCTGGCCAGTGATGGTCTGTGGGATGTTATGACAAACGAAGAGGTGTGTGACCTCGCTCGGCGACGGATAGTTCTCTGCAAAATGGAGCTTGGTCAAGAAATCTTTTTCGGTGGTGGATTCATATCAATGGCCATGATCCAAAGTCCAGTGGTTACATTACACTCTAGCAATGGTGGTGGGGGACAAGGACAAACAGTGGTGCCTAAGAAGAATCACAGTTCCTTTATTCTTTTTGGGGACTATGAATGGTGTACCTGTGCATAA 1677 0.4347 MEEMSFVVAVPLRVGNCCSVCDNPTVVPHMDVSRFKLMADTGLLSNSVTKVFTKTVAGSDDCDDSGNLEDEAGIAEVIPPKRDREGESPMLDMISQNRSTLVAGDEVLADEIEEDSLSLEGDQVVDSSCSLSAVSENSSVCGEESFCIDATSDVGTPCSAYVDKSMGAVNVVTEAVDLGESNVNTDIMTEPLAVAVSLEEENGIRTDPKPSDVVHHQLPQERGVTGMVGRSVFELDYTPLYGFISLCGRRPEMEDALATVPRFLKIPIQMLVGDRVLDGISKCFNQQMTHFFGVYDGHGGSQVAKYCQDRIHKALAEEIEFFKEALISGSMKDGCQDQWKKAFTNCFLKVDAEVGGKVDNEPVAPETVGSTAVVAVICSSHIIVANCGDSRAVLCRGKEPMALSVDHKPNRPDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFIPRTKDDECLILASDGLWDVMTNEEVCDLARRRIVLCKMELGQEIFFGGGFISMAMIQSPVVTLHSSNGGGGQGQTVVPKKNHSSFILFGDYEWCTCA* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00667 558 PANTHER PROTEIN PHOSPHATASE 196 494 IPR015655 GO:0004722|GO:0006470
Lapu8g00667 558 Gene3D - 227 504 IPR036457 -
Lapu8g00667 558 ProSiteProfiles PPM-type phosphatase domain profile. 240 558 IPR001932 -
Lapu8g00667 558 Pfam Protein phosphatase 2C 280 500 IPR001932 -
Lapu8g00667 558 SUPERFAMILY PP2C-like 233 493 IPR036457 -
Lapu8g00667 558 ProSitePatterns PPM-type phosphatase domain signature. 291 299 IPR000222 GO:0043169
Lapu8g00667 558 SMART PP2C_4 228 548 IPR001932 -
Lapu8g00667 558 CDD PP2Cc 241 494 IPR001932 -
Lapu8g00667 558 FunFam Protein phosphatase 2C 51 234 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00667 Lapu-Chr8 24582263 24587543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00667 1 495 PP2C-type Phosphatase Gene Family AT1G17550 44.773 1.61e-130 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00667 K14497 - gmx:100805281 882.093