LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu8g00666	ATGTTGGGCACTCCCCACTTACTTTTCTTCATCTTCATCACCACCTTGTTCTCCATCTTCTCTCCAATTCACTCCCTCTTCTTCAACATAACCAACTTTGATGATCCTACAACCTCATCTGACATATCCTATGAGGGTGATGGAAGATCAACCAACGGCTCCATCGATCTTAACAAAGTTAGCTACTATTTTCGTGTCGGAAGGGCTCTTTACTCCAAACCCCTCCACCTTTGGGACCCATCTTCCAATGTTGTCACCGACTTTGTCACTCGCTTCACTTTCTCCATTGACAGAGTAAACAACACTGAGAGTTTTTATGCTGATGGTTTTGTGTTTTATATAGCCCCTCTTGGCTACCAGATCCCACCAAATTCTGCAGGTGGCACCTTTGCCCTCTTCAACGCCACCACCAATAGTGACCTCCCTCAGAACCATGTTTTTGCTGTGGAGTTTGACACCTTTATTGGCTCCACTGATCCCCCAATGAAACATGTTGGTGTAAACGACAACTCTTTAACCTCTGTGGCCTTTGCCAACTTTGACATCGACAACAACCTCGGAAAAAAGTGTCACACTTTGATCACCTACACTGCCTCCACCCAAACCCTCTTTGTTTCTTGGTCCTTCAAAGGGATACCAACCCCAAAGGACAACGACAAGAATTCTTCTCTGTCTTACCAGATCGACCTCAAGAAAATTCTCCCAGAGTGGGTCAATATTGGTTTCTCTGCCTCAACTGGACTTTACACTGAACGCAATGTAATTTATTCGTGGGAGTTCTATTCCACTTTGAAGGATTCCACCGTGGATAATGAGGGTGTGAAACTGAAACACAAAGGGTCGAAGCTTGTTTTAATAGTTGTCATTCTTTGTCCTCTGGTTCTTCTGTTTCTGGTTGCGAGTGTTGGTGTTGTTATGTTGATAAGGAAAAAGAGGAGAATGGATGATTGTATGTTATATGATGCTGGCGACGACGAGCTTGGTCCAACTTCAGTTAAATTTGATTTGGATAGAGGAACTATCCCAAGAAGATTCGAGTACAAAGAACTAGTGGATGCCACTAACGGTTTTTCAGATGAAAGAAGGCTTGGACAAGGAGCTTCGGGGCAGGTTTACAAGGGTGTGTTGAGTTACCTAGGAAGAGTGGTGGCCGTGAAGAGAATCTTTGCAGACTTCGAGAATTCAGAGAGAGTTTTCATCAACGAGGTTAGAATAATAAGCCGTTTAATCCACAAAAACTTGGTCCAGTTCATAGGGTGGTGTCACGAAGAAGGTGAATTTCTGTTGGTTTTCGAATACATGCAAAATGGAAGCCTCGACACTCATTTGTTTGGAAACAAGAGGATGCTGGAGTGGCATACGAGGTACAAGATCGCATTAGGAGTTGTAACTGCGCTTCAATATCTTCATGAGGACGCAGAGCAATGTGTGCTACACAGGGACATAAAATCTGCGAATGTGTTGTTGGACATGGAATTCAACACCAAGGTGGGAGATTTTGGTATGGCCAAATTGGTGGATCCAAGGTTGAGAACTCAAAGAACTGGGGTGGTTGGAACTTACGGTTACTTAGCACCTGAATATGTCAACGGAGGAAGAGCTAGTAGAGAATCTGATATGTACAGTTTTGGAGTAGTGGCATTGGAGATAGCAAGTGGGAGGAGGACTTACCAAGATGGGGAGTTTCATGTTGGTTTGACGAATTGGGTGTGGCAGCTTTATGTGGAAGGGGAGGTTCTGAGGGCTGCAGATGAGAAATTGAGGAAGCAGTTTGATGAGAATGAGATGAAGAGTTTGCTTGTGGTGGGGTTGTGGTGCACAAACCCTTATGATAAAGAGAGGCCTAAGGCAGCACAAGTGATCAAGGTTTTGCAGCTTGAAGCACCCTTGCCAGAGCTTCCACTTGATATGTATGAACGTGCTCCTCCCATGCAAGTGGTTAGGATGCCCCATCATCAGAATAATCATCATTCAGGCCAATCACAACCCATTACTGACAGTCTTATGAGTGTTGGAAGGTGA	2022	0.4446	MLGTPHLLFFIFITTLFSIFSPIHSLFFNITNFDDPTTSSDISYEGDGRSTNGSIDLNKVSYYFRVGRALYSKPLHLWDPSSNVVTDFVTRFTFSIDRVNNTESFYADGFVFYIAPLGYQIPPNSAGGTFALFNATTNSDLPQNHVFAVEFDTFIGSTDPPMKHVGVNDNSLTSVAFANFDIDNNLGKKCHTLITYTASTQTLFVSWSFKGIPTPKDNDKNSSLSYQIDLKKILPEWVNIGFSASTGLYTERNVIYSWEFYSTLKDSTVDNEGVKLKHKGSKLVLIVVILCPLVLLFLVASVGVVMLIRKKRRMDDCMLYDAGDDELGPTSVKFDLDRGTIPRRFEYKELVDATNGFSDERRLGQGASGQVYKGVLSYLGRVVAVKRIFADFENSERVFINEVRIISRLIHKNLVQFIGWCHEEGEFLLVFEYMQNGSLDTHLFGNKRMLEWHTRYKIALGVVTALQYLHEDAEQCVLHRDIKSANVLLDMEFNTKVGDFGMAKLVDPRLRTQRTGVVGTYGYLAPEYVNGGRASRESDMYSFGVVALEIASGRRTYQDGEFHVGLTNWVWQLYVEGEVLRAADEKLRKQFDENEMKSLLVVGLWCTNPYDKERPKAAQVIKVLQLEAPLPELPLDMYERAPPMQVVRMPHHQNNHHSGQSQPITDSLMSVGR*	674

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu8g00666	673	CDD	lectin_legume_LecRK_Arcelin_ConA	28	264	IPR001220	GO:0030246
	Lapu8g00666	673	SUPERFAMILY	Concanavalin A-like lectins/glucanases	24	264	IPR013320	-
	Lapu8g00666	673	MobiDBLite	consensus disorder prediction	650	673	-	-
	Lapu8g00666	673	Gene3D	Phosphorylase Kinase; domain 1	342	433	-	-
	Lapu8g00666	673	FunFam	L-type lectin-domain containing receptor kinase IX.1	342	433	-	-
	Lapu8g00666	673	MobiDBLite	consensus disorder prediction	651	673	-	-
	Lapu8g00666	673	FunFam	L-type lectin-domain containing receptor kinase IX.1	434	634	-	-
	Lapu8g00666	673	Pfam	Legume lectin domain	27	268	IPR001220	GO:0030246
	Lapu8g00666	673	ProSitePatterns	Legume lectins alpha-chain signature.	234	243	IPR000985	-
	Lapu8g00666	673	Gene3D	Transferase(Phosphotransferase) domain 1	434	629	-	-
	Lapu8g00666	673	Gene3D	-	24	277	-	-
	Lapu8g00666	673	SMART	serkin_6	357	626	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu8g00666	673	ProSitePatterns	Protein kinases ATP-binding region signature.	363	386	IPR017441	GO:0005524
	Lapu8g00666	673	ProSiteProfiles	Protein kinase domain profile.	357	633	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu8g00666	673	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	477	489	IPR008271	GO:0004672\|GO:0006468
	Lapu8g00666	673	PANTHER	-	51	629	-	-
	Lapu8g00666	673	Pfam	Protein kinase domain	358	621	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu8g00666	673	SUPERFAMILY	Protein kinase-like (PK-like)	341	642	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu8g00666	Lapu-Chr8	24573350	24575520	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu8g00666	7	637	Receptor kinase-like Gene Family	AT5G10530	44.844	0.0	528

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Lapu8g00666		Pkinase	4.1e-50	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu8g00666	-		-	vun:114193012	1211.82