Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00657 ATGACTGTGGTGGAGGATCATAAAACGGATGACCTCAGAGACGAGTTTCCCATAGGAATGCGTGTTCTTGCTGTTGACGATGACTCAACATGTCTCATGATTTTGGAGACTATGCTACGACGGTGCCAATACCATGTCTCAAATTTAGTTGTGGATATTGCAGTAACAACAACTAAAAATGCAAAAACAGCATTGAATCTGTTGAGAGGAAACAAAAACAGGTTTGACCTGGTAATCAGCGATGTCCAAATGCCAGACATGGATGGATTTAAGCTGCTTGAGCTTGTGGGGCTTGAGATGGACCTACCTGTCATAAGTAAGAAGCTATGA 330 0.4242 MTVVEDHKTDDLRDEFPIGMRVLAVDDDSTCLMILETMLRRCQYHVSNLVVDIAVTTTKNAKTALNLLRGNKNRFDLVISDVQMPDMDGFKLLELVGLEMDLPVISKKL* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00657 109 Gene3D - 3 106 - -
Lapu8g00657 109 ProSiteProfiles Response regulatory domain profile. 21 109 IPR001789 GO:0000160
Lapu8g00657 109 SUPERFAMILY CheY-like 19 105 IPR011006 -
Lapu8g00657 109 PANTHER TWO-COMPONENT RESPONSE REGULATOR 20 105 IPR045279 GO:0009736
Lapu8g00657 109 Pfam Response regulator receiver domain 22 105 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00657 Lapu-Chr8 24438632 24439567 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00657 11 105 Response Regulator Gene Family AT4G31920 72.632 1.13e-41 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lapu8g00657 Response_reg 8.1e-12 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00657 - K14491 gmx:100803879 165.622