Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00655 ATGGAAGGAATAAGCAAGAAGGAGCCATACTTTTGTGACAGGCCAAGCATGTTCTCTTCTGCTCCAGAGGCACCCCCTAGTCCAAGTACTCCACTTCAGCATCCACATGAAAAGAAACAGCTATCTGTTGAGGAAGAAGAGGAAGAAAATAAGGAGCCAAAGCATGTTACCATATTGGATCTAAATGTCTCAGGTGATGATTCTTGTACTCTGGAAGGACCAGAACTCAACCTCATAACCTGTTTGGATGTAGGGTCCTCATCCAATGCAAATTCTTCTTCATCAGAAGTCCCTCTTGGTTCTGATGCAGCTGAGCCAAGAGTGTTCTCTTGCAACTACTGCCACAGAAAGTTCTACAGTTCACAAGCACTAGGGGGCCACCAAAATGCACACAAGAGGGAGAGGTCAATAGCAAAGAGAGGGCACAGGTTTGGATCACAGATGATGGCCTTTGGCCTTCCCTTGTTGCATAACAACAACCACTATGCAAGCATGGCTTCTCTACCCCTTTATGGTGCCTGCAACCACAGAGGAGGAGCTCTTGGAATTCAAGCACACTCCATGATCCAAAAGCCTTCTCATCATCATCATCATCATCATCATGTGAGTGGATTTGGAAGCTCTTATGCACACCATCACGGTTGGTCAAGACCCATCATTGACCAACAACCCGGAATAGCAAAACTGGATGTCGCTGATTTTCACAGAACAAAATCAGCATTTTCATCTTCACAAACAAGTGTTGGTAGATTTGAAATGGTTAATACCATGATGAATTCTTCAGCCAAAAAGGAAATCAGTGGATGTGTGGCTAGTGGTGAAACTCGTTTGAAGAGTAATAATCAAGAAGAAATGAAGCACCTTGATTTATCCCTCAAGCTCTAA 885 0.4395 MEGISKKEPYFCDRPSMFSSAPEAPPSPSTPLQHPHEKKQLSVEEEEEENKEPKHVTILDLNVSGDDSCTLEGPELNLITCLDVGSSSNANSSSSEVPLGSDAAEPRVFSCNYCHRKFYSSQALGGHQNAHKRERSIAKRGHRFGSQMMAFGLPLLHNNNHYASMASLPLYGACNHRGGALGIQAHSMIQKPSHHHHHHHHVSGFGSSYAHHHGWSRPIIDQQPGIAKLDVADFHRTKSAFSSSQTSVGRFEMVNTMMNSSAKKEISGCVASGETRLKSNNQEEMKHLDLSLKL* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00655 294 ProSiteProfiles Zinc finger C2H2 type domain profile. 109 136 IPR013087 -
Lapu8g00655 294 MobiDBLite consensus disorder prediction 1 58 - -
Lapu8g00655 294 ProSitePatterns Zinc finger C2H2 type domain signature. 111 131 IPR013087 -
Lapu8g00655 294 MobiDBLite consensus disorder prediction 37 56 - -
Lapu8g00655 294 SUPERFAMILY beta-beta-alpha zinc fingers 106 136 IPR036236 -
Lapu8g00655 294 Gene3D Classic Zinc Finger 88 150 - -
Lapu8g00655 294 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 6 294 IPR044246 GO:0009788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00655 Lapu-Chr8 24410751 24412105 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00655 27 294 C2H2 Transcription Factor Family AT5G10970 37.818 1.05e-41 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00655 - - gmx:100809569 408.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00655 8 24410751 24412105 Lapu9g01929 9 34136832 34137849 PCT