Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00651 ATGGCCAGACCACAACAGCGTTACCGAGGTGTCCGACAAAGGCATTGGGGCTCTTGGGTCTCCGAAATTCGCCACCCCATATTGAAGACTAGGATATGGCTTGGTACATTTGAAACAGCCGAGGATGCAGCTAGAGCCTATGATGAAGCAGCTAGGCTAATGTGTGGTGCCAGGGCAAGGACAAACTTCCCTTTCAACCCCAATGTGTCTCACACATCATCTGCTAGTTCAAAGCTTCTCTCGGCAACTTTGACTGCCAAACTGCACAGGTGCTACATGGCTTCTTTGCAAATGACAAGACAGGCTTTGGCATCATCTGAGTCTCAGAGAACACCTTCAGTGCCAAATGCCACCTCCACAACCCAACCAAGCAACTTCAGTGTGAAGAAGAGTGACCAAACTGGTGAAGTTTTGCCACACAAGAGAGCAGAGGAGGAGCAAGAGTCAGAGGCCAACAGGGGTGTTAAAATGGTCAGAGCTGTGGAAAGTGTTCCTTTGCAGTTCAAGCCTCTTGAGGAAGATCACATAGAGCAGATGATTGAGGAGCTTCTTGATTATGGCTCTGTTGAGCTCTGCTCTGTCTTTTCACCCCAGACCCTTTAA 603 0.4892 MARPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGARARTNFPFNPNVSHTSSASSKLLSATLTAKLHRCYMASLQMTRQALASSESQRTPSVPNATSTTQPSNFSVKKSDQTGEVLPHKRAEEEQESEANRGVKMVRAVESVPLQFKPLEEDHIEQMIEELLDYGSVELCSVFSPQTL* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00651 200 SMART rav1_2 7 70 IPR001471 GO:0003700|GO:0006355
Lapu8g00651 200 MobiDBLite consensus disorder prediction 134 153 - -
Lapu8g00651 200 Gene3D AP2/ERF domain 6 65 IPR036955 GO:0003700|GO:0006355
Lapu8g00651 200 CDD AP2 6 64 IPR001471 GO:0003700|GO:0006355
Lapu8g00651 200 ProSiteProfiles AP2/ERF domain profile. 7 64 IPR001471 GO:0003700|GO:0006355
Lapu8g00651 200 Pfam AP2 domain 7 56 IPR001471 GO:0003700|GO:0006355
Lapu8g00651 200 SUPERFAMILY DNA-binding domain 7 65 IPR016177 GO:0003677
Lapu8g00651 200 MobiDBLite consensus disorder prediction 103 132 - -
Lapu8g00651 200 PRINTS Ethylene responsive element binding protein signature 8 19 IPR001471 GO:0003700|GO:0006355
Lapu8g00651 200 PRINTS Ethylene responsive element binding protein signature 30 46 IPR001471 GO:0003700|GO:0006355
Lapu8g00651 200 MobiDBLite consensus disorder prediction 103 153 - -
Lapu8g00651 200 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 6 141 - -
Lapu8g00651 200 FunFam Ethylene-responsive transcription factor 2 6 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00651 Lapu-Chr8 24331659 24333074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00651 1 200 AP2-EREBP Transcription Factor Family AT5G25190 61.650 6.98e-77 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lapu8g00651 AP2 6.6e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00651 - - gmx:100785918 320.472